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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G100146_P01 |
Common Name | hdt102, ZEAMMB73_070282 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
C2H2 |
Protein Properties |
Length: 303aa MW: 32587.4 Da PI: 4.3922 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G100146_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 15.5 | 5.1e-05 | 278 | 300 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23
+C+ C+k+F++ + L+ H + H
GRMZM2G100146_P01 278 PCKSCSKTFNSEMALQAHSKAkH 300
6*****************88777 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 303 aa
Download sequence Send
to blast |
MEFWGLEVKP GSTVKCEPGH GFILHVSQAA LGESKKSDSA LMYVKVDDKK LAIGTLSIDK 60 YPQIQFDLVF NKEFELSHTS KTTSVFFSGY KVEQPIEGDE MDLDSEDEEE ELNIPVIKEN 120 GKADGKEEQK NQEKAVAATA SKSSLGLEKK SKDDSDDSDE DESDDSDEDD SDDSDEGEGL 180 SPDEGDDDSS DEDDTSDDDE EETPTPKKPE AGKKRGAENA LKTPLSDKKA KVATPPAQKT 240 GGKKGATHVA TPHPAKGKTP ANNDKSTEKS PKSGGSVPCK SCSKTFNSEM ALQAHSKAKH 300 GAK
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Expression -- UniGene
? help Back to Top |
UniGene ID |
E-value |
Expressed in |
Zm.500 | 0.0 | cell culture| ear| embryo| endosperm| leaf| meristem| pollen| root| sheath| shoot| tassel |
Functional Description ? help
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Source |
Description |
UniProt | Mediates the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT036496 | 0.0 | BT036496.1 Zea mays full-length cDNA clone ZM_BFb0119A06 mRNA, complete cds. |