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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G099797_P01 |
Common Name | RR8 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
ARR-B |
Protein Properties |
Length: 684aa MW: 73429.6 Da PI: 6.8866 |
Description |
ARR-B family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G099797_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 89.9 | 2.2e-28 | 200 | 253 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kpr++W+ eLH++Fv+av++L G++kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl
GRMZM2G099797_P01 200 KPRVVWSVELHQQFVNAVNHL-GIDKAVPKKILELMNVPGLTRENVASHLQKFRL 253
79*******************.********************************8 PP
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2 | Response_reg | 77.5 | 4.8e-26 | 17 | 125 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHH CS
Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedaleal 90
vl+vdD+p+ + +l+++l + +y +v+++ +++ al++l+e++ +D+i+ D+ mp+mdG++ll+ e++lp+i+++a + + + + +
GRMZM2G099797_P01 17 VLVVDDDPTCLVVLKRMLLECRY-DVTTCPQATRALTMLRENRrgFDVIISDVHMPDMDGFRLLELVGL-EMDLPVIMMSADSRTDIVMKGI 106
89*********************.***************99999********************87754.558******************* PP
HTTESEEEESS--HHHHHH CS
Response_reg 91 kaGakdflsKpfdpeelvk 109
k Ga d+l Kp+ +eel +
GRMZM2G099797_P01 107 KHGACDYLIKPVRMEELKN 125
****************986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009873 | Biological Process | ethylene-activated signaling pathway |
GO:0010082 | Biological Process | regulation of root meristem growth |
GO:0010119 | Biological Process | regulation of stomatal movement |
GO:0010150 | Biological Process | leaf senescence |
GO:0071368 | Biological Process | cellular response to cytokinin stimulus |
GO:0080113 | Biological Process | regulation of seed growth |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 684 aa
Download sequence Send
to blast |
MAAAEARGAD FPVGMKVLVV DDDPTCLVVL KRMLLECRYD VTTCPQATRA LTMLRENRRG 60 FDVIISDVHM PDMDGFRLLE LVGLEMDLPV IMMSADSRTD IVMKGIKHGA CDYLIKPVRM 120 EELKNIWQHV VRKKFNGNKD HEHSGSLDDT DRNRPTNNDN EYASSANDGG DGSWKSQKKK 180 REKEDDETDL ESGDPSTSKK PRVVWSVELH QQFVNAVNHL GIDKAVPKKI LELMNVPGLT 240 RENVASHLQK FRLYLKRIAQ HHAGIPHPFV ASASSAKVAP LGGLEFQALA ASGQIPPQAL 300 AALQDELLGR PTSSLALPGR DQSSLRLAAI KGNKPHGERE IAFGQPIYKC QNNTYGAFSQ 360 SSPAVGGLPS FAAWPNNKLG MTDSSNTLGN VGNSQNSNML LHELQQQPDT LLSGTLHNID 420 VKPSGVVMPS QSLNVFPASE GISHNQNPLV IPSQSPSFLA SVPPSMKHES LLGSPSPSTS 480 LLGGLDMVNQ ASTSQPLISS HGANLPGLMN RSSNAMPSPG ISNFQSGNIP YVVTQNAMGV 540 SSRPPGVLKT ECTESLTHSY GYIGGSTSVD SSLLSSQAKN PQYGLLQSQN DVSSSWLSSQ 600 DFDSFGNSLG QGHPGSTSSS FQSSALGKLP DQGRGRNHGF VGKGTCIPSR FAVDEVGSPT 660 NLSHNIVNSG DIVNPDIFGF SGQM
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB060130 | 0.0 | AB060130.1 Zea mays ZmRR8 mRNA for response regulator 8, complete cds. |
GenBank | EU975545 | 0.0 | EU975545.1 Zea mays clone 492147 two-component response regulator ARR1 mRNA, complete cds. |