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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G099461_P01 |
Common Name | CA5P15 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
NF-YC |
Protein Properties |
Length: 203aa MW: 21295.6 Da PI: 4.5894 |
Description |
NF-YC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G099461_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NF-YC | 48.9 | 1.4e-15 | 80 | 162 | 19 | 100 |
NF-YC 19 helPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaav.trtdifdflvdivprde 100
+lP+ r+k+i+++d d+k++++ea l++ a elf+ l+ + a +rrt++ + aa ++ + dfl+d +e
GRMZM2G099461_P01 80 PALPVGRVKRIMRVDRDIKKVTSEAALLIAAATELFLGSLATGAHAAAARRSRRTVRAVHVRAAArAHRPTADFLLDCLAAEE 162
579**********************************************************88761566799*****987765 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 203 aa
Download sequence Send
to blast |
MSPATADEPS VAMEEQPGKE SEEAADAMEE QLGKESEEAA ESAEEVGQVE EEPEEGVDPA 60 EAMEKAGEEA EAEEGASLRP ALPVGRVKRI MRVDRDIKKV TSEAALLIAA ATELFLGSLA 120 TGAHAAAARR SRRTVRAVHV RAAARAHRPT ADFLLDCLAA EEEAPRARQT AGSARGGGGG 180 GGGNAKPLPR GTRRIDAFFQ KVT
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ726958 | 0.0 | KJ726958.1 Zea mays clone pUT3656 CCAAT-HAP5 transcription factor (CA5P15) mRNA, partial cds. |