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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G098800_P02 |
Common Name | GRAS80, LOC100279263, ZEAMMB73_063421 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
GRAS |
Protein Properties |
Length: 708aa MW: 73942.1 Da PI: 5.9545 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G098800_P02 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 266.1 | 1.2e-81 | 350 | 707 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94
+ L ++A+a ++g+ a+++Larl+++ g+p+ R a+y++eAL la+ + + ts+ +++ +laa+k+fs+ sP+l+f+
GRMZM2G098800_P02 350 DELAAAAKAAEAGNSIGAREILARLNHQLPLLGKPFLRSASYLKEALLLALAE-----GHHGGCHLTSPLDVALKLAAYKTFSDHSPVLQFT 436
7899*************************************************.....666677788888899******************* PP
GRAS 95 hltaNqaIleavege..ervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnv 180
++ta qa+ ++++++ +++H+iDfd++ G+QW+++lq+La R+ + ps+++T+++s++s++ el+ t++++a+fA+ lg+pf+f++
GRMZM2G098800_P02 437 NFTATQALIDEIARStsSCIHVIDFDLGVGGQWASFLQELAHRRgaggAALPSVKLTAFVSAASHHPLELRLTRDNIAQFAADLGIPFQFSA 528
**********999887799************************977555589**************************************** PP
GRAS 181 lvakrledleleeLrvkp.gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271
+ + +++++ eL + +E++aV l + + +++L+lvk+l Pk+v+ +++ ad+ + +F ++fl++++ ++ l+dsl
GRMZM2G098800_P02 529 I---SADTINPAELVSATaDEVVAVVLPVGCSARA---PP----LPAILRLVKQLAPKIVIAIDHGADRADLPFSQHFLNCFQSCMFLLDSL 610
9...789999999977777********99777665...44....556********************************************* PP
GRAS 272 eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWk 363
+a + +++ k+E++l++++i+++v +g+ + Wr+++ +aGF pvp s+ a++qa++ll++v+++g++ve+ l+l+W+
GRMZM2G098800_P02 611 DAA-GIDADSTCKIEKFLIQPRIEDAVLGRGKV-----DKPIAWRSAFAAAGFAPVPPSNLAEAQADCLLKRVQVRGFHVEKCGVGLTLYWQ 696
888.78999********************9997.....78899************************************************* PP
GRAS 364 drpLvsvSaWr 374
+Lv+vSaWr
GRMZM2G098800_P02 697 CGELVTVSAWR 707
**********8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 708 aa
Download sequence Send
to blast |
MRAALFGAER NGAADLVGDG KTLFWPEGKA KVLLEPRSVL DCTRSLSPNN STSTLSSSVG 60 GGAADSTGMA VASDSSAAAE ATKWGAPGEH GGGGKEDWAG GCELPPIPTG LDMGVGGGDS 120 WDAMLGNAAA AGQDQTFLNW IIGAAGDLDQ PGPPLPVHQQ PLLDNVGFGF PAADPLGFTL 180 DPHLCGLACD MSSPGAVSHT TNSSGGGNKA SSAFGLFSPE SASLQPPPPP VLFHEGIDTK 240 PPLLGAQLPG LLHQYQHQPT PGTTFFMPIP SFPDPNQRSP LIQPPPKRPQ SIGDDLYLAR 300 NRLLPPPAGQ GHAFPPLNGP SPFQLQPSPP LSHGAMKTTA AEAAQQQLLD ELAAAAKAAE 360 AGNSIGAREI LARLNHQLPL LGKPFLRSAS YLKEALLLAL AEGHHGGCHL TSPLDVALKL 420 AAYKTFSDHS PVLQFTNFTA TQALIDEIAR STSSCIHVID FDLGVGGQWA SFLQELAHRR 480 GAGGAALPSV KLTAFVSAAS HHPLELRLTR DNIAQFAADL GIPFQFSAIS ADTINPAELV 540 SATADEVVAV VLPVGCSARA PPLPAILRLV KQLAPKIVIA IDHGADRADL PFSQHFLNCF 600 QSCMFLLDSL DAAGIDADST CKIEKFLIQP RIEDAVLGRG KVDKPIAWRS AFAAAGFAPV 660 PPSNLAEAQA DCLLKRVQVR GFHVEKCGVG LTLYWQCGEL VTVSAWRC
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT063504 | 0.0 | BT063504.1 Zea mays full-length cDNA clone ZM_BFc0070G06 mRNA, complete cds. |