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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G098784_P01 |
Common Name | LOC100381402, ZEAMMB73_674634 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
GRAS |
Protein Properties |
Length: 734aa MW: 82407.3 Da PI: 6.3035 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G098784_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 390.3 | 2.2e-119 | 359 | 730 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92
l++ L++cA+av+++d + a++lL+++++++ p+gd +qRla++f+ +L+arla+++s+ly++l +++t+ s+ l+a++lf +sP+ +
GRMZM2G098784_P01 359 LRTILIHCAQAVAADDRRTANELLKQIRHHSKPNGDGTQRLAHCFADGLEARLAGTGSQLYRKLIAKRTT---ASDMLKAYHLFLAASPFKR 447
5789************************************************************999998...89***************** PP
GRAS 93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlv 182
+sh++ Nq+Il ++++++vHiiDf+i G+QWp+L++ L++R++gpp lRiTg++ p++g +e++eetg+rLa++Ae+++vpfe++ +
GRMZM2G098784_P01 448 LSHFLSNQTILSLTKNASKVHIIDFGIYFGFQWPCLIRRLSKREGGPPVLRITGIDVPQPGfrPTERIEETGQRLAEYAEKFKVPFEYQG-I 538
************************************************************9*****************************.7 PP
GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
a+++e++++e+L+v ++E+++Vn+ ++ +l de+v+++s+r++vL+++++++P ++++ + +++ + F +rf eal ++salfd+le++
GRMZM2G098784_P01 539 ASKWESIRVEDLKVGKDEVVIVNCLYRFRNLIDETVAVDSPRNRVLNTIRQVNPAIFIHGIVNGSYSVPFFITRFREALFHFSALFDMLETT 630
******************************************************************************************** PP
GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366
+pr++ +r+ +Ere++gre+ nv+aceg++r+er et+++W+ r +aGF + pl+++++++a ++ ++ + + ++e++g+l++gWk+r
GRMZM2G098784_P01 631 VPRDDAQRALIEREMFGREALNVIACEGSDRVERPETYKQWQVRNLRAGFVQSPLNQEIVMKAMDKVKDIYHKDFVIDEDNGWLLQGWKGRI 722
***********************************************************************888****************** PP
GRAS 367 LvsvSaWr 374
L+++S W+
GRMZM2G098784_P01 723 LYAISTWK 730
*******8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 734 aa
Download sequence Send
to blast |
MGLDNTYGEL SGMFYGGLSY DGYADHSSAS DYFRFADPLP AVVPQMAAEA CSNPSSTVSR 60 ANTEADNPED WEFISDESLN YISRMLMEED IDEKVSMYQA ESAALRAAAK PFYDILGHKF 120 PPSPDRQVMP WPMDSPSESS GSICTQSVAS AVTSSSVGGT VDSNRCYDVG HSEQLEAFRG 180 LCGQSSHPLV GASSDASNAV GELEDILITN GGIPEYLFES LPTWDFRRGI EEAQKSLPVS 240 DKLVIDLETG GIARPQEARK DVPMNAKKDD VLKAKKNRQS EDLDLMEGRN IKQSAFCSDE 300 PGWIEMFDDL LRQTEKKATV LRELMRSEAS KNSQVTQMKG PSGPRPRGRK PTKNDVVDLR 360 TILIHCAQAV AADDRRTANE LLKQIRHHSK PNGDGTQRLA HCFADGLEAR LAGTGSQLYR 420 KLIAKRTTAS DMLKAYHLFL AASPFKRLSH FLSNQTILSL TKNASKVHII DFGIYFGFQW 480 PCLIRRLSKR EGGPPVLRIT GIDVPQPGFR PTERIEETGQ RLAEYAEKFK VPFEYQGIAS 540 KWESIRVEDL KVGKDEVVIV NCLYRFRNLI DETVAVDSPR NRVLNTIRQV NPAIFIHGIV 600 NGSYSVPFFI TRFREALFHF SALFDMLETT VPRDDAQRAL IEREMFGREA LNVIACEGSD 660 RVERPETYKQ WQVRNLRAGF VQSPLNQEIV MKAMDKVKDI YHKDFVIDED NGWLLQGWKG 720 RILYAISTWK PKNN
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Expression -- UniGene
? help Back to Top |
UniGene ID |
E-value |
Expressed in |
Zm.37155 | 0.0 | ear| embryo| endosperm| meristem| ovary| shoot |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT061176 | 0.0 | BT061176.1 Zea mays full-length cDNA clone ZM_BFb0119A04 mRNA, complete cds. |