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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
GRMZM2G096709_P01 |
| Common Name | GRF10, GRF3, Zm.83885 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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| Family |
GRF |
| Protein Properties |
Length: 269aa MW: 28540.8 Da PI: 4.8828 |
| Description |
GRF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GRMZM2G096709_P01 | genome | MaizeSequence | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRC | 71 | 1.4e-22 | 179 | 217 | 1 | 39 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrs 39
++epgrCrRtDGKkWRC+r++++++k+CErH+hrgr+r
GRMZM2G096709_P01 179 EPEPGRCRRTDGKKWRCWRNTIPNEKYCERHMHRGRKRP 217
69***********************************96 PP
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| 2 | QLQ | 53.2 | 8.9e-19 | 113 | 148 | 2 | 37 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37
aFTa+Qlq+L++Q +y+y+aa++PvP +L+++++k
GRMZM2G096709_P01 113 AFTAMQLQELEQQSRVYQYMAARVPVPTHLVFPVWK 148
8*********************************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 269 aa
Download sequence Send
to blast |
MTAEGEAKNP SAGGGGDNPQ HQQAAPAPAP AQGEVAQEAA VQGTGQEQER DKADREVQGG 60
AGEKDDGACR DLVLVEDPEV LAVEDPEEAA ATAALQEEMK ALVASIPDGA GAAFTAMQLQ 120
ELEQQSRVYQ YMAARVPVPT HLVFPVWKSV TGASSEGAQK YPTLMGLATL CLDFGKNPEP 180
EPGRCRRTDG KKWRCWRNTI PNEKYCERHM HRGRKRPVQV FLEDDEPDSA SGSKPAAPGK 240
ATEGAKKADD KSPSSKKLAV AAPAAVQST
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| Expression -- UniGene
? help Back to Top |
| UniGene ID |
E-value |
Expressed in |
| Zm.83885 | 0.0 | ear| embryo| meristem| ovary| shoot| silk| tassel |
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Highly expressed in shoots (Ref.1, PubMed:24854713). Expressed in developing leaves (Ref.1, PubMed:24854713). {ECO:0000269|PubMed:24854713, ECO:0000269|Ref.1}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Involved in the regulation of cell proliferation in developing shoots and leaves (PubMed:24854713). Does not possess transactivation activity (PubMed:24854713). {ECO:0000269|PubMed:24854713}. |
| Function -- GeneRIF ? help
Back to Top |
- ZmGRF10 aids in fine-tuning the homeostasis of the GRF-GIF complex in the regulation of cell proliferation.
[PMID: 24854713]
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| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT042513 | 0.0 | BT042513.1 Zea mays full-length cDNA clone ZM_BFb0310G14 mRNA, complete cds. |
| GenBank | BT087437 | 0.0 | BT087437.1 Zea mays full-length cDNA clone ZM_BFb0076N13 mRNA, complete cds. |
| GenBank | EF515849 | 0.0 | EF515849.1 Zea mays putative growth-regulating factor 10 (GRF10) mRNA, complete cds. |
| GenBank | EU960601 | 0.0 | EU960601.1 Zea mays clone 226522 growth-regulating factor mRNA, complete cds. |
| Publications
? help Back to Top |
- Alexandrov NN, et al.
Insights into corn genes derived from large-scale cDNA sequencing.
Plant Mol. Biol., 2009. 69(1-2): p. 179-94
[PMID:18937034] - Soderlund C, et al.
Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.
PLoS Genet., 2009. 5(11): p. e1000740
[PMID:19936069] - Schnable PS, et al.
The B73 maize genome: complexity, diversity, and dynamics.
Science, 2009. 326(5956): p. 1112-5
[PMID:19965430] - Wu L, et al.
Overexpression of the maize GRF10, an endogenous truncated growth-regulating factor protein, leads to reduction in leaf size and plant height.
J Integr Plant Biol, 2014. 56(11): p. 1053-63
[PMID:24854713] - Zhang D, et al.
GRF-interacting factor1 Regulates Shoot Architecture and Meristem Determinacy in Maize.
Plant Cell, 2018. 30(2): p. 360-374
[PMID:29437990]
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