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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G082264_P01 |
Common Name | mwp1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
G2-like |
Protein Properties |
Length: 477aa MW: 48352.4 Da PI: 7.5175 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G082264_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 101.7 | 4.8e-32 | 282 | 335 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
GRMZM2G082264_P01 282 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 335
9****************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009887 | Biological Process | organ morphogenesis |
GO:0009944 | Biological Process | polarity specification of adaxial/abaxial axis |
GO:0009956 | Biological Process | radial pattern formation |
GO:0010051 | Biological Process | xylem and phloem pattern formation |
GO:0010158 | Biological Process | abaxial cell fate specification |
GO:0010229 | Biological Process | inflorescence development |
GO:0048481 | Biological Process | plant ovule development |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 477 aa
Download sequence Send
to blast |
MEASSAASPD LSLHISLPSS AAGSGPSGRR AAVGGGTGGG GGAGGDPWRR LNGSTASTEL 60 SLSPPVEQEH ADALPWRHRP SAAAASSAAT TSAGATLMPA MPMLQPLDGG GGLGAGAGAG 120 GGASVALPIR GIPIYNGPGG FPFLPPASGA DGAPLHHHQQ QQKLGFYGSY HPSTWPSSLG 180 STSPSPSPLA PGTPPSPLLD PASAAFLSPA AHHHHRMLSA SGRLNGMLTD TLRGYGAGGV 240 GGLGGIVGGH HHHHHHLHGA QPFGLGSRFM PKLPAKRSMR APRMRWTSTL HARFVHAVEL 300 LGGHERATPK SVLELMDVKD LTLAHVKSHL QMYRTVKSTD KPAASSGAND GGSGDEDFAG 360 GGQAGSGGEN MCARPFGEHR STSEGAASSV GGGGGGDMDQ SSAGNGSTRW SNSSRDPWLS 420 SNSCNMDAHR LAALSSPIEN GEPCRSSSSQ VSNQELMSSP SLEFTLGRPD WQGTDHD
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j4r_A | 2e-16 | 283 | 337 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 2e-16 | 283 | 337 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 2e-16 | 283 | 337 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 2e-16 | 283 | 337 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in roots, stems, leaves and flowers. {ECO:0000269|PubMed:18594992}. |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that regulates abaxial identity during leaf development. {ECO:0000269|PubMed:18594992}. |
Function -- GeneRIF ? help
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- Recessive mutations in the maize (Zea mays) KANADI (KAN) gene milkweed pod1 (mwp1), which promotes abaxial cell identity, strongly affect development of the prophyll and silks (fused carpels).
[PMID: 20213690]
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU925398 | 0.0 | EU925398.1 Zea mays milkweed pod1 (mwp1) mRNA, complete cds. |
GenBank | EU954667 | 0.0 | EU954667.1 Zea mays clone 1476543 myb-like DNA-binding domain, SHAQKYF class family protein mRNA, complete cds. |
Publications
? help Back to Top |
- Candela H,Johnston R,Gerhold A,Foster T,Hake S
The milkweed pod1 gene encodes a KANADI protein that is required for abaxial/adaxial patterning in maize leaves. Plant Cell, 2008. 20(8): p. 2073-87 [PMID:18757553] - Alexandrov NN, et al.
Insights into corn genes derived from large-scale cDNA sequencing. Plant Mol. Biol., 2009. 69(1-2): p. 179-94 [PMID:18937034] - Johnston R,Candela H,Hake S,Foster T
The maize milkweed pod1 mutant reveals a mechanism to modify organ morphology. Genesis, 2010. 48(7): p. 416-23 [PMID:20213690]
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