PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea

Family

bZIP

Protein Properties

Length: 314aa MW: 35226.3 Da PI: 10.7755

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GRMZM2G080731_P02	genome	MaizeSequence	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.7	3.3e-10	49	89	5	45
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k+ rr+++NReAAr+sR+RKka++e+Le+ +L++ ++L GRMZM2G080731_P02 49 KALRRLAQNREAARKSRLRKKAYVEQLENSRLKLSQLEQEL 89 788*************************9877777766655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.3E-4	43	143	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.036	47	91	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.4E-7	49	89	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.3E-7	49	94	No hit	No description
SuperFamily	SSF57959	8.13E-7	49	92	No hit	No description
PROSITE pattern	PS00036	0	52	67	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	2.3E-31	133	205	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence Send to blast
MAYASPGTDD TSTDLDTDEK NHMLELGQLV SLTASDSGNK AKDKLLGQKA LRRLAQNREA 60 ARKSRLRKKA YVEQLENSRL KLSQLEQELQ RARQQGIFIP TPGDDQQPNS TSEKGALAFD 120 KDYAGWEDEH RKQISELRAA LSAHAGDDEL RRIVDGVMAH HHEAFRLKCV AARADAFHVL 180 SGMWKTPVER CFMWLGGFRP SEILKYSSSQ AIWTPSPSGS SRAYTACSSP RSKPKRASRS 240 GCKRCSSRSR RPSRRQGPRA CLCLQVVLLR LATTPLQTAR GRWRRRLRSL SLLKAWCMRL 300 TVCGGRLLSR CSAC

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Zm.7472	0.0	silk

Expression -- Microarray ? help Back to Top
Source	ID
Expression Atlas	GRMZM2G080731

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	GRMZM2G080731_P02

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	BT037374	0.0	BT037374.1 Zea mays full-length cDNA clone ZM_BFb0166L17 mRNA, complete cds.
GenBank	BT042450	0.0	BT042450.1 Zea mays full-length cDNA clone ZM_BFb0274O23 mRNA, complete cds.
GenBank	JX469940	0.0	JX469940.1 Zea mays subsp. mays clone UT3200 bZIP-type transcription factor mRNA, partial cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008654627.1	0.0	putative bZIP transcription factor superfamily protein isoform X3
Swissprot	Q41558	6e-91	HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBL	B4FJT6	1e-148	B4FJT6_MAIZE; Transcription factor TGA6
TrEMBL	K4JRQ7	1e-148	K4JRQ7_MAIZE; BZIP-type transcription factor (Fragment)
STRING	GRMZM2G080731_P03	1e-136	(Zea mays)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12250.5	7e-74	TGACG motif-binding factor 6

Link Out ? help Back to Top
Phytozome	GRMZM2G080731_P02