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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G069525_P01 |
Common Name | LOC100217256 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
G2-like |
Protein Properties |
Length: 312aa MW: 33135.2 Da PI: 8.8973 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G069525_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 95.7 | 3.6e-30 | 19 | 72 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
pr+rW+ +LH++Fv+a+++LGG++kAtPk il++m+ gLt++hvkSHLQ+YR
GRMZM2G069525_P01 19 PRMRWSADLHRSFVQAIDSLGGQHKATPKLILQFMGARGLTISHVKSHLQMYRA 72
9****************************************************6 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 312 aa
Download sequence Send
to blast |
MGSGRNGAVV RRYVRSKEPR MRWSADLHRS FVQAIDSLGG QHKATPKLIL QFMGARGLTI 60 SHVKSHLQMY RAASLGAERG GGTPAQLLQR RYSCSGDERG GPKEEFLCCP PPPPLKRARM 120 GYESMQGSHG VSDARTTAGG GGLYCIDDYM QAMAVGWRIK EEGLIRWQRR DAAAATPSNL 180 QAMGCLVQES GPFKQVRRPE AHRLGSALKQ QDGDDSSKED GNDGRPQSSN AATKEDEASE 240 QCSLSLSLGN LDAKCGRGMA AAASSRSGES SCILTASPAR RSSSDCSGHS GCFVVGPGGV 300 VSLELSLSIC GS
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j4r_A | 6e-17 | 20 | 73 | 3 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 6e-17 | 20 | 73 | 3 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 6e-17 | 20 | 73 | 3 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 6e-17 | 20 | 73 | 3 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT038218 | 0.0 | BT038218.1 Zea mays full-length cDNA clone ZM_BFb0217P21 mRNA, complete cds. |