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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G066373_P01 |
Common Name | LOC103637892, ZEAMMB73_356593, Zm.35539 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
GeBP |
Protein Properties |
Length: 310aa MW: 33309.5 Da PI: 10.4345 |
Description |
GeBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G066373_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF573 | 48.6 | 2.2e-15 | 116 | 195 | 3 | 88 |
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqki 88
+q+lwse Dei+lL G fk++tg p d+ ++++ +++s+ + + + K++rLK Kf++ v + s++h++
GRMZM2G066373_P01 116 VQKLWSEADEIALLTGAAAFKDRTGIAPRLpDMGELFDSIRDSLAPHLDQAKVYYKLKRLKSKFQHSVPG-------DSSTAHEHRL 195
79************************98877**********************************98876.......3344444444 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 310 aa
Download sequence Send
to blast |
MPSKRPSPHA MDEAASATAA AAAATARLRP STPRSKKRTS RSKSRGRRRS PNPNPSSRRE 60 GSADHASAAP SRKSDRKPKP RSFPDSATLA TAMASVSAAA AAAPSSGAGR GSAGAVQKLW 120 SEADEIALLT GAAAFKDRTG IAPRLPDMGE LFDSIRDSLA PHLDQAKVYY KLKRLKSKFQ 180 HSVPGDSSTA HEHRLRDLGA ALWGAELTRP EENAAEEAAD ADDIDGNREG AVKLPMVKEV 240 LGEYWRLNGQ TMSGVSLEKG LALLGSQEAS DTEVKWRRQL EADMRMQMRR HDLEKEVYGL 300 LIDAIKGLGP
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ728057 | 0.0 | KJ728057.1 Zea mays clone pUT6203 GeBP transcription factor (GBP10) gene, partial cds. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT1G66420.1 | 8e-10 | DNA-binding storekeeper protein-related transcriptional regulator |