PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G066373_P01
Common NameLOC103637892, ZEAMMB73_356593, Zm.35539
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family GeBP
Protein Properties Length: 310aa    MW: 33309.5 Da    PI: 10.4345
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G066373_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57348.62.2e-15116195388
             DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqki 88 
                        +q+lwse Dei+lL G   fk++tg  p   d+ ++++ +++s+  +  +  +  K++rLK Kf++ v         + s++h++  
  GRMZM2G066373_P01 116 VQKLWSEADEIALLTGAAAFKDRTGIAPRLpDMGELFDSIRDSLAPHLDQAKVYYKLKRLKSKFQHSVPG-------DSSTAHEHRL 195
                        79************************98877**********************************98876.......3344444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.1E-14117204IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    Send to blast
MPSKRPSPHA MDEAASATAA AAAATARLRP STPRSKKRTS RSKSRGRRRS PNPNPSSRRE  60
GSADHASAAP SRKSDRKPKP RSFPDSATLA TAMASVSAAA AAAPSSGAGR GSAGAVQKLW  120
SEADEIALLT GAAAFKDRTG IAPRLPDMGE LFDSIRDSLA PHLDQAKVYY KLKRLKSKFQ  180
HSVPGDSSTA HEHRLRDLGA ALWGAELTRP EENAAEEAAD ADDIDGNREG AVKLPMVKEV  240
LGEYWRLNGQ TMSGVSLEKG LALLGSQEAS DTEVKWRRQL EADMRMQMRR HDLEKEVYGL  300
LIDAIKGLGP
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.355390.0leaf| ovary| tassel
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G066373
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G066373_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7280570.0KJ728057.1 Zea mays clone pUT6203 GeBP transcription factor (GBP10) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008659132.10.0STOREKEEPER protein
TrEMBLA0A1D6NSE60.0A0A1D6NSE6_MAIZE; Uncharacterized protein
STRINGGRMZM2G066373_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26822763
Representative plantOGRP1273145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66420.18e-10DNA-binding storekeeper protein-related transcriptional regulator