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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G064466_P01 |
Common Name | LOC100281545 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
TALE |
Protein Properties |
Length: 612aa MW: 64715.2 Da PI: 6.8374 |
Description |
TALE family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G064466_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 27.2 | 6.8e-09 | 357 | 394 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54
Fe ++yps ++ LA+++gL+ +qV++WF N R +
GRMZM2G064466_P01 357 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 394
664459******************************88 PP
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2 | BELL | 92.3 | 4.8e-30 | 209 | 278 | 2 | 71 |
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeq 71
+elq+ kakL +l+eV++rY++y+eq+++v++sFeavag +a+ Yt+lA+++iSrhFr+++d +a q
GRMZM2G064466_P01 209 AAELQRLKAKLYAMLQEVERRYRRYREQMRAVAGSFEAVAGERAAAAYTRLAQRTISRHFRSVRDGVAAQ 278
5799***************************************************************998 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 612 aa
Download sequence Send
to blast |
MAHDEPGFAY ADYFAAAAGA VATFVPEVDV GGGGEEGLHL YGLQPHHQQP GVEMYGARGH 60 MPPAAMMAAH GGKAALGLDV ASPVVGGHFG DDHLRQALQA PLSLSLHDDG TADAAPLALH 120 HHHHHLGGVP QAQQHQPPGA WPQPQQQGAW HLRGSRFLRP TQQLLQEFCT LPVDTVTSTP 180 AKPASVEDGV GSSSSAAAPS QQIIQAMDAA ELQRLKAKLY AMLQEVERRY RRYREQMRAV 240 AGSFEAVAGE RAAAAYTRLA QRTISRHFRS VRDGVAAQMQ AVRRALGEKD ADDGGVVPAA 300 AGMMANKGET TPRLRVIDQC LRQHRAYQTG VVLESQPWRP QRGLPERAVS ILRAWMFEHF 360 LHPYPSDVDK HILARQTGLS RSQVSNWFIN ARVRLWKPMV EEMYSEEMKD PKEGACSNAN 420 SSVNTGAGYA SEELGQPLGH GGACGGVDEQ KPTRAQLVHD AGSLASAVSI GSSRDQQQIS 480 SINFRMMDHL DFDAYSGDPA AAGGPAAGFG GAGASGGVSL TLGLQQHADG DPHGGVNIAF 540 AAAPSAAHEF LFMAGGGEHR MVAAGAVHPS SSHGHGQFAA SMQGDSAGVA SSHYHRGLGA 600 ATGFQLLHDL AG
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
4xrm_A | 1e-16 | 344 | 402 | 5 | 63 | Homeobox protein Meis2 |
4xrm_B | 1e-16 | 344 | 402 | 5 | 63 | Homeobox protein Meis2 |
4xrs_A | 8e-17 | 344 | 401 | 1 | 58 | Homeobox protein Meis1 |
4xrs_B | 8e-17 | 344 | 401 | 1 | 58 | Homeobox protein Meis1 |
5bng_A | 8e-17 | 344 | 402 | 1 | 59 | Homeobox protein Meis2 |
5bng_B | 8e-17 | 344 | 402 | 1 | 59 | Homeobox protein Meis2 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU957060 | 0.0 | EU957060.1 Zea mays clone 1581614 bell-like homeodomain protein 3 mRNA, complete cds. |