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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G060507_P01 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
TALE |
Protein Properties |
Length: 191aa MW: 22232.2 Da PI: 6.3703 |
Description |
TALE family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G060507_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 24.7 | 4e-08 | 141 | 174 | 21 | 54 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54
k +yp+++++++L +++gL+ +q+ +WF N+R +
GRMZM2G060507_P01 141 KWPYPTEDDKARLVEETGLQLKQINNWFINQRKR 174
469*****************************87 PP
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2 | ELK | 26.3 | 1.7e-09 | 95 | 116 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22
ELK +L++++++++ ++++E++
GRMZM2G060507_P01 95 ELKIELKQGFKSRIEDVREEIL 116
9*******************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 191 aa
Download sequence Send
to blast |
MLLCSFREQL QQHVRVHAVE AVMACREIEQ SLQDLTGVTL EEGTGATMSE EDEDEAPMLE 60 VGLVDMGSDG HDMMGFGPLL PTDSERSLME RVRQELKIEL KQGFKSRIED VREEILRKRR 120 AGKLPGDTTS ILKQWWQQHS KWPYPTEDDK ARLVEETGLQ LKQINNWFIN QRKRNWHNNS 180 QTSTLKSKRK R
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 171 | 190 | RKRNWHNNSQTSTLKSKRKR |
Expression --
Description ? help
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Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: Expressed in embryo at 3 days after pollination (DAP). {ECO:0000269|PubMed:10095070}. |
Uniprot | TISSUE SPECIFICITY: Isoform 1 is expressed in roots and flowers, and at lower levels in leaf blades and leaf sheaths. Isoform 2 is expressed in roots and flowers. {ECO:0000269|PubMed:12034492}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ728496 | 0.0 | KJ728496.1 Zea mays clone pUT6801 HB transcription factor (HB20) mRNA, partial cds. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT1G62990.1 | 1e-112 | KNOTTED-like homeobox of Arabidopsis thaliana 7 |