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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G050590_P01 |
Common Name | E2F5, LOC100285276 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
E2F/DP |
Protein Properties |
Length: 468aa MW: 50676.2 Da PI: 5.8862 |
Description |
E2F/DP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G050590_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | E2F_TDP | 78.7 | 5.4e-25 | 192 | 257 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71
r+++sL llt+kf++ll+ +e+g+++ln++a++L +v ++RRiYDi+NVLe+++liek kn +rwkg
GRMZM2G050590_P01 192 RYDSSLSLLTKKFINLLQGAEDGALDLNKAAETL---EV--QKRRIYDITNVLEGVHLIEKGLKNMVRWKG 257
6899******************************...99..****************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0000902 | Biological Process | cell morphogenesis |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0042023 | Biological Process | DNA endoreduplication |
GO:0051782 | Biological Process | negative regulation of cell division |
GO:0005667 | Cellular Component | transcription factor complex |
GO:0005730 | Cellular Component | nucleolus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 468 aa
Download sequence Send
to blast |
MDGASSSLPL PQPPPQVYLR RPVPPPGPPL QAAPRVQPFS APAPIPIFSS KPRAAVRSPI 60 PPPHLPAAVT SAPAPLAATA EAPSRPPPAS TDQPPQQQTG AMPPPPAPAP AGKGGPKPKA 120 QLNEQNSGEY SQSENNVVET AQGHDKETTP GPVKATKRIK KLKASKHNLN NTNSGAIEGD 180 ADPSLSSLNH CRYDSSLSLL TKKFINLLQG AEDGALDLNK AAETLEVQKR RIYDITNVLE 240 GVHLIEKGLK NMVRWKGFDI SKPKDIERQI SSLKEELESL YDEELRLDDE IREAKEKLQA 300 LALDGDKRKS LYLLKEDINK IPHFQRSTMI AINAPRGTCV EVPDPNADQY MYGNLGLQEK 360 HYKIVLRSSM GPVDCYLISG DHEDIFNQGQ LVAADRLKPA VATDSSQDLQ QMDCDPNQAS 420 NGGCMHAAEP SRKQEIGILR IVPSDADADA DYWLASGVDV SMTDAWGT
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ726878 | 0.0 | KJ726878.1 Zea mays clone pUT3419 E2F-DP transcription factor (E2F5) mRNA, partial cds. |