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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G041701_P01 |
Common Name | LOC100279729, ZEAMMB73_265177 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
E2F/DP |
Protein Properties |
Length: 462aa MW: 50278.2 Da PI: 4.8253 |
Description |
E2F/DP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G041701_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | E2F_TDP | 82.7 | 3e-26 | 145 | 209 | 1 | 70 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwk 70
r+++sL+llt+kf++ll+++++gi++ln++a+ L +v ++RRiYDi+NVLe+++liek+ kn+irwk
GRMZM2G041701_P01 145 RYDNSLGLLTKKFINLLKQAPDGILDLNNAAEVL---EV--QKRRIYDITNVLEGIGLIEKTLKNRIRWK 209
689*******************************...99..****************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0008284 | Biological Process | positive regulation of cell proliferation |
GO:0009733 | Biological Process | response to auxin |
GO:0010090 | Biological Process | trichome morphogenesis |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0051302 | Biological Process | regulation of cell division |
GO:0051446 | Biological Process | positive regulation of meiotic cell cycle |
GO:0005634 | Cellular Component | nucleus |
GO:0005667 | Cellular Component | transcription factor complex |
GO:0005737 | Cellular Component | cytoplasm |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 462 aa
Download sequence Send
to blast |
MSGVGSGRPP AAQKILQSLR PPLSFSTPSR PPFAAPDDYH RFPTPAAATS PAATSGGVGA 60 GAAPPDTVEE GLVIRTPLKR KATSEENAAA DSSSCIITSP MLTPVSAKTV KASKAKAKNS 120 KTGPQTPTSN VGSPLNPPTP VGTCRYDNSL GLLTKKFINL LKQAPDGILD LNNAAEVLEV 180 QKRRIYDITN VLEGIGLIEK TLKNRIRWKA LDDSSVQLDN GISALQAEVE NLSLQEQALD 240 ERISDIREKL RGLTEDENNQ RWLYVTEDDI KGLPSFQNET LIAIKAPHGT TLEVPDPDEA 300 GDYLQRRYRI VLRSTMGPID VYLVSQFDEK FEELGGVATP AKHSNVPRHQ PAEDFNTSYA 360 GQSSTLMGVA HDAQHSQKIP QDPSALHDFG GMTRISPSDV HTDSDYWLLT EGDVSMTDMW 420 KTEQAQWDEM DFLSEDVVTP RAHNQQLVTV DGPHMEVPST DP
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Expression --
Description ? help
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Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: Expressed in a cell cycle-dependent manner. Most abundant in early S phase. Decreased expression during the passage into G2. {ECO:0000269|PubMed:11108847, ECO:0000269|PubMed:11669580, ECO:0000269|PubMed:11786543}. |
Uniprot | TISSUE SPECIFICITY: Highly expressed in the shoot apical meristem, emerging leaf primordia, and vascular tissues of young leaf primordia. Expressed in flowers, in epidermis and cortex of hypocotyls, and at lower levels in leaves. {ECO:0000269|PubMed:11108847, ECO:0000269|PubMed:11889041}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that binds DNA cooperatively with DP proteins through the E2 recognition site, 5'-TTTC[CG]CGC-3' found in the promoter region of a number of genes whose products are involved in cell cycle regulation or in DNA replication. The binding of retinoblastoma-related proteins represses transactivation. Regulates gene expression both positively and negatively. Activates the expression of E2FB. Involved in the control of cell-cycle progression from G1 to S phase. Stimulates cell proliferation and delays differentiation. {ECO:0000269|PubMed:11669580, ECO:0000269|PubMed:11786543, ECO:0000269|PubMed:11862494, ECO:0000269|PubMed:11889041, ECO:0000269|PubMed:11891240, ECO:0000269|PubMed:12913157, ECO:0000269|PubMed:15377755, ECO:0000269|PubMed:16514015, ECO:0000269|PubMed:19662336}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT054772 | 0.0 | BT054772.1 Zea mays full-length cDNA clone ZM_BFb0035J13 mRNA, complete cds. |