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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G041223_P01 |
Common Name | Zm.25395 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
GRF |
Protein Properties |
Length: 381aa MW: 40728.5 Da PI: 8.5676 |
Description |
GRF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G041223_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRC | 78.2 | 7.8e-25 | 113 | 157 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45
d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e+
GRMZM2G041223_P01 113 DPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEA 157
79****************************************996 PP
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2 | QLQ | 58.1 | 2.7e-20 | 58 | 93 | 2 | 37 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37
FTaaQ ++L++Q+l+yKyL+a++PvPp+Ll+++++
GRMZM2G041223_P01 58 LFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRR 93
6********************************985 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 381 aa
Download sequence Send
to blast |
MAMPFASLSP AADHRPSSLL PYCRAAPLSA VGEDAAAQAQ QQQQHAMSGR WAARPPALFT 60 AAQYEELEHQ ALIYKYLVAG VPVPPDLLLP LRRGFVYHQP ALGYGPYFGK KVDPEPGRCR 120 RTDGKKWRCS KEAAPDSKYC ERHMHRGRNR SRKPVEAQLV PPPHAQQQQQ QQAPAPTAGF 180 QSHPMYPSIL AGNGGGGGGV GGGAGGGGTF GLGPTSQLHM DSAAAYATAA GGGSKDLRYS 240 AYGVKSLSDE HSQLLSGGGG MDASMDNSWR LLPSQTAATF QATSYPLFGA LSGLDESTIA 300 SLPKTQREPL SFFGSDFVTP KQENQTLRPF FDEWPKSRDS WPELNEDNSL GSSATQLSIS 360 IPMAPSDFNT SSRSPNGIPS R
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that plays a regulatory role in gibberellin-induced stem elongation. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EF515845 | 0.0 | EF515845.1 Zea mays putative growth-regulating factor 6 (GRF6) mRNA, complete cds. |