|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
GRMZM2G036966_P01 |
Common Name | LOC100381403 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
|
Family |
GeBP |
Protein Properties |
Length: 424aa MW: 46686 Da PI: 10.5272 |
Description |
GeBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G036966_P01 | genome | MaizeSequence | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF573 | 32.1 | 3.2e-10 | 54 | 144 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfk.vsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifels 92
fqr ws De+ +L++l +++ ++g +++ + +s++ + v ++l K r++K+++ ++v k + + +h++ + ls
GRMZM2G036966_P01 54 PFQRAWSPGDEVRILKALATYRREHGG-RLPTPVELFGALDGSLEKEgVGAKELAIKQRSFKRRYDRDVMK-----NAPPADKHERRLYLLS 139
59************************5.56666677888888887654999*****************999.....455678999******* PP
DUF573 93 kkiWg 97
k +Wg
GRMZM2G036966_P01 140 KHVWG 144
****8 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 424 aa
Download sequence Send
to blast |
MAPSSPQLKE PSSAVKQAST GPAALPERTK RKTSPSLPEA SGATQQPAKR KPPPFQRAWS 60 PGDEVRILKA LATYRREHGG RLPTPVELFG ALDGSLEKEG VGAKELAIKQ RSFKRRYDRD 120 VMKNAPPADK HERRLYLLSK HVWGRVPPPR PPVAKVGSAT QAKGAGAQAS KADAQAQAQA 180 KSADHQSGKE ALKPKAKTLD EMRELYPYLV DEATILVEPA VLERVLLNIG DIDAQVLDKK 240 IRKARKQLAD AITESARINN MEVPTIFLFT SSKLQPEKLR VENENNLLVD HLEKMDDVDI 300 CAKQRLARVE REVKELRQTV IAYQSQAKGI ICESAKGGLQ SIVAENQTPA NILQKKTEVP 360 NDLIHKKNAA VTSKYHCAVP HNVPPNKPKM QGVMLPPSKA FPGMPRKIDK SPTPRKAIWK 420 GPIC
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | BT061180 | 0.0 | BT061180.1 Zea mays full-length cDNA clone ZM_BFb0119I15 mRNA, complete cds. |
Best hit in Arabidopsis thaliana ? help
Back to Top |
Hit ID |
E-value |
Description |
AT4G00610.1 | 1e-07 | DNA-binding storekeeper protein-related transcriptional regulator |