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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G035370_P04 |
Common Name | LOC103645799 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
G2-like |
Protein Properties |
Length: 424aa MW: 46459.4 Da PI: 7.3456 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G035370_P04 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 102.8 | 2.1e-32 | 249 | 303 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k+r+rWt++LHerFv+ v+qLGG++kAtPk il+lm+ +gLt++h+kSHLQkYR+
GRMZM2G035370_P04 249 KTRIRWTQDLHERFVDSVNQLGGADKATPKGILKLMNSDGLTIYHIKSHLQKYRI 303
68****************************************************7 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 424 aa
Download sequence Send
to blast |
MMDAKKIKLH DYHLYGSQQL FPAAGGLSFH PAAGLMSSLP QPPHAAWLHE DHHTTTPRSV 60 LATHGSLQGS RCVGSDAAAF FAAEELMMGM PRFDDCPLGG TEMTAFAKRP TTEDEQLHYR 120 RPGPVDPLPL RDSAAVRTYY VRPQQRDGAT EAPPSLELPF QQGRRQQQQL FGNASTGRLL 180 GGEPKAHSFT AHVATSTLLP AMEAPAGMQQ SPTENPLSRS CSTIGAPATH VGSGNVAAAA 240 APGHGAPSKT RIRWTQDLHE RFVDSVNQLG GADKATPKGI LKLMNSDGLT IYHIKSHLQK 300 YRIAKYMPAS STSEGKQEKR AVGNDVQNLD PSTGMKITEA LRVQLDVQRR LHEQLEIQRN 360 LQLRIEVQGK KLQKMFEEQM KASRTVMEPR QEEEDDDDDA FNDVHVQLLA AAARSDAGFQ 420 LNIS
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j4k_A | 5e-22 | 249 | 306 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 5e-22 | 249 | 306 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 4e-22 | 249 | 306 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 4e-22 | 249 | 306 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 4e-22 | 249 | 306 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 4e-22 | 249 | 306 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 5e-22 | 249 | 306 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 5e-22 | 249 | 306 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 5e-22 | 249 | 306 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 5e-22 | 249 | 306 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 5e-22 | 249 | 306 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 5e-22 | 249 | 306 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT068513 | 0.0 | BT068513.1 Zea mays full-length cDNA clone ZM_BFb0272J03 mRNA, complete cds. |
GenBank | EU957486 | 0.0 | EU957486.1 Zea mays clone 1594418 transfactor mRNA, complete cds. |
GenBank | KJ726831 | 0.0 | KJ726831.1 Zea mays clone pUT3371 G2-like transcription factor (GLK52) mRNA, partial cds. |