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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G035370_P01 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
G2-like |
Protein Properties |
Length: 467aa MW: 51625.6 Da PI: 8.0794 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G035370_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 102.6 | 2.4e-32 | 287 | 341 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k+r+rWt++LHerFv+ v+qLGG++kAtPk il+lm+ +gLt++h+kSHLQkYR+
GRMZM2G035370_P01 287 KTRIRWTQDLHERFVDSVNQLGGADKATPKGILKLMNSDGLTIYHIKSHLQKYRI 341
68****************************************************7 PP
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Plant Ontology ? help Back to Top |
PO Term |
PO Category |
PO Description |
PO:0006505 | anatomy | central spike of ear inflorescence |
PO:0020142 | anatomy | stem internode |
PO:0001083 | developmental stage | inflorescence development stage |
PO:0007006 | developmental stage | IL.00 inflorescence just visible stage |
PO:0007016 | developmental stage | whole plant flowering stage |
PO:0007072 | developmental stage | LP.18 eighteen leaves visible stage |
PO:0007116 | developmental stage | LP.11 eleven leaves visible stage |
Sequence ? help Back to Top |
Protein Sequence Length: 467 aa
Download sequence Send
to blast |
MLLIKLVYLL LRLISWFAVP VCFPARLFSP DTWSGDRWMM DAKKIKLHDY HLYGSQQLFP 60 AAGGLSFHPA AGLMSSLPQP PHAAWLHEDH HTTTPRSVLA THGSLQGSRC VGSDAAAFFA 120 AEELMMGMPR FDDCPLGGTE MTAFAKRPTT EDEQLHYRRP GPVDPLPLRD SAAVRTYYVR 180 PQQRDGATEA PPSLELPFQQ GRRQQQQLFG NASTGRLLGG EPKAHSFTAH VATSTLLPAM 240 EAPAGMQQSP TENPLSRSCS TIGAPATHVG SGNVAAAAAP GHGAPSKTRI RWTQDLHERF 300 VDSVNQLGGA DKATPKGILK LMNSDGLTIY HIKSHLQKYR IAKYMPASST SEGNLIYRKQ 360 EKRAVGNDVQ NLDPSTGMKI TEALRVQLDV QRRLHEQLEI QRNLQLRIEV QGKKLQKMFE 420 EQMKASRTVM EPRQEEEDDD DDAFNDVHVQ LLAAAARSDA GFQLNIS
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j4k_A | 3e-22 | 287 | 344 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 3e-22 | 287 | 344 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 3e-22 | 287 | 344 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 3e-22 | 287 | 344 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 3e-22 | 287 | 344 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 3e-22 | 287 | 344 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 3e-22 | 287 | 344 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 3e-22 | 287 | 344 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 3e-22 | 287 | 344 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 3e-22 | 287 | 344 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 3e-22 | 287 | 344 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 3e-22 | 287 | 344 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT068513 | 1e-122 | BT068513.1 Zea mays full-length cDNA clone ZM_BFb0272J03 mRNA, complete cds. |
GenBank | EU957486 | 1e-122 | EU957486.1 Zea mays clone 1594418 transfactor mRNA, complete cds. |
GenBank | KJ726831 | 1e-122 | KJ726831.1 Zea mays clone pUT3371 G2-like transcription factor (GLK52) mRNA, partial cds. |