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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G028766_P01 |
Common Name | LOC100274362, ZEAMMB73_682270 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
C2H2 |
Protein Properties |
Length: 416aa MW: 47042.3 Da PI: 5.3981 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G028766_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 14.4 | 0.00011 | 43 | 67 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH..T CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirt..H 23
++C+dCgk+++++ + H ++ H
GRMZM2G028766_P01 43 FVCSDCGKPCRSQTEVDLHTKRtgH 67
89***************99998666 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 416 aa
Download sequence Send
to blast |
MAGLSLLCGD CGAQLRSVEE AQAHAEATNH ANFVESTEAV LNFVCSDCGK PCRSQTEVDL 60 HTKRTGHTEF ADKTAEAAKP IDLEAPLKPA SEDVMDVDTS ASASGEPQEM VVPEVNKEML 120 TDLEGMGFST ARATRVLHFS GNSTIEGAIN WLSEHQEDID IDEMPLVPAN SKTEDNKPSL 180 TPEEMKIKAQ ELRDRARKKK EEEERRMERE REKERIRIGK ELLEAKRIEE QNERKRMIEL 240 RKLEKEEEKR AREKIRQKLE EDKAERRRKL GLPPEDPAAA KPSAPLPVEE KKSALPVRPA 300 TKAERMRDCL RNLKQQNKDD DAKVKRAFQT LLTYIGNVAK NPDEEKFRKI RLTNATFQER 360 VGNLHVGIEF LELCGFEKLE GNEYLFLARE KVDKAILNTA GAELNSAITN PFFGVL
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Expression -- UniGene
? help Back to Top |
UniGene ID |
E-value |
Expressed in |
Zm.93858 | 0.0 | ear| embryo| endosperm| meristem| root| shoot| tassel |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT042856 | 0.0 | BT042856.1 Zea mays full-length cDNA clone ZM_BFc0051P17 mRNA, complete cds. |