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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
GRMZM2G025062_P01 |
| Common Name | EREB200, Zm.160951 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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| Family |
ERF |
| Protein Properties |
Length: 235aa MW: 25733.6 Da PI: 6.2943 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GRMZM2G025062_P01 | genome | MaizeSequence | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 59.1 | 1.1e-18 | 74 | 123 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
y+G+r+++ +g+W+AeIrdp + +r++lg+f tae Aa+a+++a+++++g+
GRMZM2G025062_P01 74 YRGIRRRP-WGKWAAEIRDPAK---GARVWLGTFATAEAAARAYDRAARRIRGA 123
9*******.**********843...4*************************985 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 235 aa
Download sequence Send
to blast |
MCGGAIISEF IPHRGAKRGL CAEDIWPHAA ADFDDLLHAH AHAHGHDDDD FAAAASFHPD 60
QEPPARKRER KTMYRGIRRR PWGKWAAEIR DPAKGARVWL GTFATAEAAA RAYDRAARRI 120
RGAKAKVNFP NEDPPPEYDD DDDGHAHAHA AAAQGMLAMS AGGGRDDHLV DYDVVDVMGM 180
GGFFQHHAYV PDAVAQQEQV PTVAYVHHQP PPQQPQGAAG MDMWTFDAIN TPVPM
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| Nucleic Localization
Signal ? help
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| No. |
Start |
End |
Sequence |
| 1 | 64 | 72 | ARKRERKTM |
| 2 | 66 | 80 | KRERKTMYRGIRRRP |
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Mostly expressed in stems and leaves, and, to a lower extent, in roots, siliques and flowers. {ECO:0000269|PubMed:18836139, ECO:0000269|PubMed:9192694}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:9159183}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By 1-aminocyclopropane-1-carboxylic acid (ACC, ethylene precursor), methyl jasmonate (MeJA), and Botrytis cinerea. Also induced by cadmium. {ECO:0000269|PubMed:18836139, ECO:0000269|PubMed:9159183}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KJ728348 | 0.0 | KJ728348.1 Zea mays clone pUT6630 AP2-EREBP transcription factor (EREB200) mRNA, partial cds. |
| Publications
? help Back to Top |
- Bueso E, et al.
The lithium tolerance of the Arabidopsis cat2 mutant reveals a cross-talk between oxidative stress and ethylene.
Plant J., 2007. 52(6): p. 1052-65
[PMID:17931347] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Chen YC, et al.
Root defense analysis against Fusarium oxysporum reveals new regulators to confer resistance.
Sci Rep, 2014. 4: p. 5584
[PMID:24998294] - Deslauriers SD,Alvarez AA,Lacey RF,Binder BM,Larsen PB
Dominant gain-of-function mutations in transmembrane domain III of ERS1 and ETR1 suggest a novel role for this domain in regulating the magnitude of ethylene response in Arabidopsis.
New Phytol., 2015. 208(2): p. 442-55
[PMID:25988998] - Bui LT,Giuntoli B,Kosmacz M,Parlanti S,Licausi F
Constitutively expressed ERF-VII transcription factors redundantly activate the core anaerobic response in Arabidopsis thaliana.
Plant Sci., 2015. 236: p. 37-43
[PMID:26025519] - Gasch P, et al.
Redundant ERF-VII Transcription Factors Bind to an Evolutionarily Conserved cis-Motif to Regulate Hypoxia-Responsive Gene Expression in Arabidopsis.
Plant Cell, 2016. 28(1): p. 160-80
[PMID:26668304] - Liu W, et al.
Ethylene response factor AtERF72 negatively regulates Arabidopsis thaliana response to iron deficiency.
Biochem. Biophys. Res. Commun., 2017. 491(3): p. 862-868
[PMID:28390898] - Yao Y,Chen X,Wu AM
ERF-VII members exhibit synergistic and separate roles in Arabidopsis.
Plant Signal Behav, 2017. 12(6): p. e1329073
[PMID:28537474]
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