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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G024530_P01 |
Common Name | bHLH171, LOC732777, ZEAMMB73_884818, Zm.96245 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
bHLH |
Protein Properties |
Length: 481aa MW: 51576.6 Da PI: 4.8747 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G024530_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 34.5 | 3.8e-11 | 331 | 376 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
h+++Er RR++i +++ +L++l+P++ K +Ka++L + ++++k Lq
GRMZM2G024530_P01 331 HSIAERLRREKISDRMKNLQDLVPNS-----NKADKASMLDEIIDHVKFLQ 376
99***********************7.....5******************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 481 aa
Download sequence Send
to blast |
MDFSAGSYFT SWPVNSASES YSLADGSVES YGGEGIMPPS SYFMTARSDH NLKFSVHEQD 60 STMLPNDQLT YAGARQTDLL PGETPSRDKL CENLLELQRL QNNSSLPSNL VPPGVLQHNS 120 TPGAFHPQLN TPGLSELPHA LSSSIDSNGS EVSAFLADLN AVSSASALCS TFQNASSFME 180 PVNLEAFSFQ GAQSDSVLNK TTHPNGNISV FDSAALASLH DSKEFISGRL PSFASVQETN 240 VAASGFKTQK QEQNAVCNVP IPTFTARNQI AVAAMPGSLI PQKIPSWINE NKSEGPVSHP 300 SDVQIQPNSV GNGVGVKPRV RARRGQATDP HSIAERLRRE KISDRMKNLQ DLVPNSNKAD 360 KASMLDEIID HVKFLQLQVK VLSMSRLGAP GAVLPLLAES QTEGYRGQLL SAPTNAQGLL 420 DTEESEDTFA FEEEVVKLME TSITSAMQYL QNKGLCLMPV ALASAISTQK GVSAASIPPE 480 Q
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Expression -- UniGene
? help Back to Top |
UniGene ID |
E-value |
Expressed in |
Zm.96245 | 0.0 | cell culture| embryo| endosperm| meristem| pericarp| shoot |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT033571 | 0.0 | BT033571.1 Zea mays full-length cDNA clone ZM_BFb0223I07 mRNA, complete cds. |
GenBank | BT087988 | 0.0 | BT087988.1 Zea mays full-length cDNA clone ZM_BFb0341G16 mRNA, complete cds. |