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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G021339_P03 |
Common Name | pco078109, ZEAMMB73_703215 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
HD-ZIP |
Protein Properties |
Length: 299aa MW: 33147.1 Da PI: 4.2768 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G021339_P03 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 64.7 | 1.3e-20 | 34 | 87 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++t+eq++ Le+ Fe+++++ e+++eLA+klgL+ rqV vWFqNrRa++k
GRMZM2G021339_P03 34 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWK 87
5678*************************************************9 PP
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2 | HD-ZIP_I/II | 132.8 | 1.3e-42 | 33 | 124 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
ekkrrl+ eqv+lLE+sFeee+kLeperK+elar+LglqprqvavWFqnrRAR+ktkqlE+d+++Lk+++dal++++++L +++++Lr+++
GRMZM2G021339_P03 33 EKKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASFDALRADHDALLQDNHRLRSQVV 124
69**************************************************************************************9986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0001558 | Biological Process | regulation of cell growth |
GO:0009637 | Biological Process | response to blue light |
GO:0009651 | Biological Process | response to salt stress |
GO:0009965 | Biological Process | leaf morphogenesis |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 299 aa
Download sequence Send
to blast |
MLGLEEGRGV KRPFYTSPDE LLEEEYYDEQ LPEKKRRLTP EQVHLLERSF EEENKLEPER 60 KTELARKLGL QPRQVAVWFQ NRRARWKTKQ LERDFDRLKA SFDALRADHD ALLQDNHRLR 120 SQVVSLTEKL REKEATEGDA NGAAAALPAV GVVRASVADD VEEPEPEPEP EAEAAAFEER 180 QVKSEDRLST GSGGSAVVDA ADALLYNGRI GGAAVDSSVE SYFPGAEVQD QYHGCGTMGP 240 VTHGAGGIQS DDDDGAGSDE GCSYYADEEA AAAFLSEHTH HADGDDEDAG QVSWWWMWN
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in seedlings, stems, leaf sheaths and blades and panicles. {ECO:0000269|PubMed:17999151}. |
Uniprot | TISSUE SPECIFICITY: Expressed in seedlings, stems, leaf sheaths and blades and panicles. {ECO:0000269|PubMed:17999151}. |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |
UniProt | Probable transcription factor. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT067017 | 0.0 | BT067017.1 Zea mays full-length cDNA clone ZM_BFb0151L17 mRNA, complete cds. |