 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
GRMZM2G021339_P01 |
| Common Name | pco078109, ZEAMMB73_703215 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 339aa MW: 36998.5 Da PI: 4.3558 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GRMZM2G021339_P01 | genome | MaizeSequence | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 64.5 | 1.5e-20 | 74 | 127 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++t+eq++ Le+ Fe+++++ e+++eLA+klgL+ rqV vWFqNrRa++k
GRMZM2G021339_P01 74 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWK 127
5678*************************************************9 PP
|
| 2 | HD-ZIP_I/II | 132.5 | 1.6e-42 | 73 | 164 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
ekkrrl+ eqv+lLE+sFeee+kLeperK+elar+LglqprqvavWFqnrRAR+ktkqlE+d+++Lk+++dal++++++L +++++Lr+++
GRMZM2G021339_P01 73 EKKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASFDALRADHDALLQDNHRLRSQVV 164
69**************************************************************************************9986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0001558 | Biological Process | regulation of cell growth |
| GO:0009637 | Biological Process | response to blue light |
| GO:0009651 | Biological Process | response to salt stress |
| GO:0009965 | Biological Process | leaf morphogenesis |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0042803 | Molecular Function | protein homodimerization activity |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 339 aa
Download sequence Send
to blast |
MESGRLIFNA PGSGAGQMLF LDCGAGGGPG GGLLHRGGRP MLGLEEGRGV KRPFYTSPDE 60
LLEEEYYDEQ LPEKKRRLTP EQVHLLERSF EEENKLEPER KTELARKLGL QPRQVAVWFQ 120
NRRARWKTKQ LERDFDRLKA SFDALRADHD ALLQDNHRLR SQVVSLTEKL REKEATEGDA 180
NGAAAALPAV GVVRASVADD VEEPEPEPEP EAEAAAFEER QVKSEDRLST GSGGSAVVDA 240
ADALLYNGRI GGAAVDSSVE SYFPGAEVQD QYHGCGTMGP VTHGAGGIQS DDDDGAGSDE 300
GCSYYADEEA AAAFLSEHTH HADGDDEDAG QVSWWWMWN
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 121 | 129 | RRARWKTKQ |
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in seedlings, stems, leaf sheaths and blades and panicles. {ECO:0000269|PubMed:17999151}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT067017 | 0.0 | BT067017.1 Zea mays full-length cDNA clone ZM_BFb0151L17 mRNA, complete cds. |
