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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G020016_P01 |
Common Name | LOC103630552, Zm.1164 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
ERF |
Protein Properties |
Length: 210aa MW: 21726.6 Da PI: 10.9213 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G020016_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.6 | 1.5e-18 | 54 | 104 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56
+y+GVr ++ +gr++AeIrd + r +r++lg+++t+ +Aa a+++a+ +l+g+
GRMZM2G020016_P01 54 HYRGVRKRP-WGRYAAEIRDpW-----RkTRVWLGTYDTPVDAAMAYDRAAVALRGA 104
6********.**********88.....45*************************985 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 210 aa
Download sequence Send
to blast |
MQQMEWDTRG GGGGGGGGGG GHGGAVGDGG PRGGGLTVGG VAVGVADQQR VEAHYRGVRK 60 RPWGRYAAEI RDPWRKTRVW LGTYDTPVDA AMAYDRAAVA LRGAKARTNF AAGRGSRATP 120 PVQARPLPYP ALAPGHFGVL DGARSSPWHV VYLPPPRLHH AVAPPMPLVA VAGDAASSLP 180 STALELRTGP KALPFDLNEP PSLLLGSRSP
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT040420 | 0.0 | BT040420.1 Zea mays full-length cDNA clone ZM_BFc0090F19 mRNA, complete cds. |
GenBank | EU973503 | 0.0 | EU973503.1 Zea mays clone 399837 mRNA sequence. |
GenBank | KJ726942 | 0.0 | KJ726942.1 Zea mays clone pUT3488 AP2-EREBP transcription factor (EREB93) mRNA, partial cds. |