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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G017520_P01 |
Common Name | MYB128, Zm.4245 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
MYB |
Protein Properties |
Length: 427aa MW: 47325.8 Da PI: 7.0494 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G017520_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 56 | 9.3e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g W++eEde+l + ++++G g+W+t+++ g+ R++k+c++rw +yl
GRMZM2G017520_P01 14 KGLWSPEEDEKLMNHITKHGHGCWSTVPKLAGLQRCGKSCRLRWINYL 61
678*******************************************97 PP
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2 | Myb_DNA-binding | 47.8 | 3.2e-15 | 67 | 109 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
rg++++eE++l+v++++ lG++ W+ Ia +++ gRt++++k+ w+
GRMZM2G017520_P01 67 RGAFSEEEEDLIVELHAVLGNR-WSQIATRLP-GRTDNEIKNLWN 109
89********************.*********.*********998 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 427 aa
Download sequence Send
to blast |
MGRHSCCYKQ KLRKGLWSPE EDEKLMNHIT KHGHGCWSTV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGAF SEEEEDLIVE LHAVLGNRWS QIATRLPGRT DNEIKNLWNS SIKKKLRQKG 120 IDPNTHKPLL VEVERSKAAP TTSTERTSES SDVDPSSGGA LGNSSHLLLS ETAQSPQLPA 180 LGKHRRETTS LAHLRVPPKE LFLDQLVSGH ENLTGCRTAG PVPNFPFQQL MCYSNEFGNK 240 NGASNNSLWF NHNETSGSTI STVMPPVSPS TLSTSTGLNR SPDNPHSGGT GIQSTQFYWD 300 TANPSSCSSR GSSGSNGLGF ELQSTSSLLE SSVFPWTELT PDKNSQVHLG EELKWPDLLH 360 GTFTDTPATM QNLSQSLYED VIKAESQFNI EGLCAAWSQN LQPQQHLQVS DLYDKDLQRM 420 SLSFENI
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ726901 | 0.0 | KJ726901.1 Zea mays clone pUT3446 MYB transcription factor (MYB128) mRNA, partial cds. |