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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G016370_P01 |
Common Name | GLK5, ZEAMMB73_872572, Zm.93172 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
G2-like |
Protein Properties |
Length: 453aa MW: 48702.2 Da PI: 6.5125 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G016370_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 101 | 7.8e-32 | 275 | 330 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k+r++W+peLH+rF++a++qLGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+
GRMZM2G016370_P01 275 KARRCWAPELHRRFLQALQQLGGSHVATPKQIRELMNVDGLTNDEVKSHLQKYRLH 330
68****************************************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 453 aa
Download sequence Send
to blast |
MEMDPPPPPP LHADRRLRFR DYLLALEEER RKIQVFQREL PLCLDLVTQT IEGMRSHMDS 60 VVVGSEETVS DHGGPVLEEF MPLKPTTLSS SSSQPQSQDD HDSAHYLEHR RAAAATANDV 120 VDADKDDEAL GDPETAAASS SRPLPHPETK KAMPDWLQSV QLWSNQQQPS VSPPQHQDEL 180 LLPCRPVALN ACRKSGGAFQ PFEKEKKKED KEEKQRAELE LPLPAAASSA VVGDSCDRAG 240 ATDTDTDTAE NNKASSTKGG KDKEAQLSSQ APSRKARRCW APELHRRFLQ ALQQLGGSHV 300 ATPKQIRELM NVDGLTNDEV KSHLQKYRLH TRRPNSAAAA VQSGGTSVVA PPAAPQFVVV 360 GGIWVPPPEY AAAAAAQPQQ VHVHLAGDAS GTTTTAADKV YAPVATTLTP APRPRPRPGP 420 ERQSSSCSGA RRNGDACSGS PAVSSSSSQT ASA
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j4r_A | 3e-13 | 275 | 328 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 3e-13 | 275 | 328 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 3e-13 | 275 | 328 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 3e-13 | 275 | 328 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcriptional repressor that may play a role in response to nitrogen. May be involved in a time-dependent signaling for transcriptional regulation of nitrate-responsive genes. Binds specifically to the DNA sequence motif 5'-GAATC-3' or 5'-GAATATTC-3'. Represses the activity of its own promoter trough binding to these motifs. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by nitrate. {ECO:0000269|PubMed:23324170}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT035536 | 0.0 | BT035536.2 Zea mays full-length cDNA clone ZM_BFb0068J14 mRNA, complete cds. |