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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G013657_P01 |
Common Name | EREB171, LOC100279334 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
AP2 |
Protein Properties |
Length: 412aa MW: 45298.2 Da PI: 8.9964 |
Description |
AP2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G013657_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 53.1 | 8.2e-17 | 74 | 133 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55
s y+GV++++++gr++A+++d ++n+ k+ k+++lg ++ +e Aa+a++ a++k++g
GRMZM2G013657_P01 74 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDDEEAAARAYDLAALKYWG 133
57*******************766644468557*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 412 aa
Download sequence Send
to blast |
MASPNPEAAG LQAVAVAGAG EGGSSSSLSA VAGAAALSGE LVPRRALALR KERVCTAKER 60 ISRMPPCAAG KRSSIYRGVT RHRWTGRYEA HLWDKSTWNQ NQNKKGKQVY LGAYDDEEAA 120 ARAYDLAALK YWGAGTQINF PVSDYARDLE EMQMISKEDY LVSLRRKSSA FYRGLPKYRG 180 LLRQLHNSRW DTSLGLGNDY MSLSCGKDIM LDGKFAGSFG LERKIDLTNY IRWWLPKKTR 240 QSDTSKTEEI ADEIRAIESS MQQTEPYKLP SLGFSSPSKP SSMGLSACSI LSQSDAFKSF 300 LEKSTKLSEE CSLSKEIVEG KTVASVPATG YDTGAININM NELLVQRSTY SMAPVMPTPM 360 KSTWSPADPS VDPLFWSNFV LPSSQPVTMA TITTTTFAKN EVSSSDPFQS QE
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT040258 | 0.0 | BT040258.1 Zea mays full-length cDNA clone ZM_BFc0073M24 mRNA, complete cds. |
GenBank | BT054058 | 0.0 | BT054058.1 Zea mays full-length cDNA clone ZM_BFc0159N21 mRNA, complete cds. |
GenBank | BT055719 | 0.0 | BT055719.1 Zea mays full-length cDNA clone ZM_BFb0137I19 mRNA, complete cds. |
GenBank | EU966890 | 0.0 | EU966890.1 Zea mays clone 297967 AP2 domain transcription factor mRNA, complete cds. |