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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G013617_P02 |
Common Name | HB38 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
TALE |
Protein Properties |
Length: 279aa MW: 30422.5 Da PI: 9.8258 |
Description |
TALE family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G013617_P02 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 27.8 | 4.4e-09 | 115 | 152 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54
Fe ++yp+ ++ LA+++gL+ +qV++WF N R +
GRMZM2G013617_P02 115 FEHflHPYPNDVDKHILARQTGLSRSQVSNWFINARVR 152
554459******************************98 PP
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2 | BELL | 56.7 | 6e-19 | 1 | 43 | 30 | 72 |
BELL 30 lqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72
++ v sFeavag g++++Yt+lAl+a+SrhFrcL+da++ q+
GRMZM2G013617_P02 1 MRSVEVSFEAVAGAGASQVYTRLALRAMSRHFRCLRDALVAQV 43
778889**********************************996 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 279 aa
Download sequence Send
to blast |
MRSVEVSFEA VAGAGASQVY TRLALRAMSR HFRCLRDALV AQVRALRKAM GERDGGPAGA 60 AAGATKGDTP RLKVLDQCLR QQRAFQHPGT IDNYPWRPQR GLPERAVAVL RAWLFEHFLH 120 PYPNDVDKHI LARQTGLSRS QVSNWFINAR VRLWKPMIEE MYTEEVNPKP ADDTSQNPSA 180 GGGVGVGVAI KPEQQVSTAA AGATIGGGGG DHLFGPSYPS MYGSHGGAVS LTLGLQQQPF 240 ASTMMHQRRP LMTFQGDEQE PALPYRDLMG SQLLHHFAG
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Expression --
Description ? help
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Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: Early expression is detected in the inflorescence apex of developing flowers and also in the ovule primordium and the integuments. {ECO:0000269|PubMed:8521490}. |
Uniprot | TISSUE SPECIFICITY: Expressed in both floral and vegetative tissues. {ECO:0000269|PubMed:8521490}. |
Functional Description ? help
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Source |
Description |
UniProt | Plays a major role in ovule patterning and in determination of integument identity via its interaction with MADS-box factors. Formation of complex with AG-SEP dimers negatively regulates the carpel identity process and favors the maintenance of ovule identity. BEL1-STM complex maintains the indeterminacy of the inflorescence meristem. Required, with SPL, for cytokinin-induced PIN1 expression in ovules (PubMed:22786869). {ECO:0000269|PubMed:12244239, ECO:0000269|PubMed:17693535, ECO:0000269|PubMed:22786869}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT039909 | 0.0 | BT039909.1 Zea mays full-length cDNA clone ZM_BFc0050K05 mRNA, complete cds. |
GenBank | EU954552 | 0.0 | EU954552.1 Zea mays clone 1470067 mRNA sequence. |