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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G008558_P02 |
Common Name | GBP10, LOC103629895 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
GeBP |
Protein Properties |
Length: 306aa MW: 33172.4 Da PI: 10.3748 |
Description |
GeBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G008558_P02 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF573 | 46.2 | 1.3e-14 | 107 | 183 | 3 | 85 |
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehd 85
+q+lwse De++lL G fk++tg p d+ +++e +++s+ + + + K++rLK Kf++ v + s++h+
GRMZM2G008558_P02 107 VQKLWSEVDEVALLTGAAAFKDRTGIAPRLpDMGELFESIRGSLAPHLDQAKVYYKLKRLKSKFQHSVLG-------DSSTAHE 183
79************************98877*********************************998766.......3344444 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 306 aa
Download sequence Send
to blast |
MPSKRPTPHA MDEAASASAA AARLRASTPR SKKRTSRSKS RGRSPNPNPS SRRERAADHG 60 SAAPSRKSDR KPNRSFPDSA TLATAMASVP AASAPSSGGG RGSAGAVQKL WSEVDEVALL 120 TGAAAFKDRT GIAPRLPDMG ELFESIRGSL APHLDQAKVY YKLKRLKSKF QHSVLGDSST 180 AHEHRLRDLG AALWGAELTR PEENAVVTAE ETTDPDEGFI DEDREGSVKL PMVKEVLGEY 240 WRLNGQTMSG VSLEKGLVLL GSQQASVVEV KWRRQLEADM RMQMRRHDLE KEVYGLLIDA 300 IKGLGP
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ728057 | 0.0 | KJ728057.1 Zea mays clone pUT6203 GeBP transcription factor (GBP10) gene, partial cds. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT1G66420.1 | 3e-09 | DNA-binding storekeeper protein-related transcriptional regulator |