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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G006871_P01 |
Common Name | LOC100277156, ZEAMMB73_466571, Zm.79754 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
GeBP |
Protein Properties |
Length: 270aa MW: 28395.8 Da PI: 8.4615 |
Description |
GeBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G006871_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF573 | 42.4 | 2e-13 | 50 | 147 | 3 | 97 |
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk...aksgkepsfskehdqkife 90
f r+wse De+ +L Gl ++a +g++p ++a + +++++ +++ eK+rrL+ K+ ++++ ++ +e
GRMZM2G006871_P01 50 FGRVWSEADEVRILEGLAAYAAAHGAEPRRsQLHAALGG-CGLDKSEFTVTEIYEKVRRLRTKYANRRSAggvPVPAAAGGAGDGDEARKYE 140
88***********************99887344444333.3455889999*****************99944312222334456678889** PP
DUF573 91 lskkiWg 97
ls++iWg
GRMZM2G006871_P01 141 LSRSIWG 147
******8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 270 aa
Download sequence Send
to blast |
MPPPPTSAPH SLAADDFHTS DTAAAAAGAV VPCAASQPGT NGGKKPAFAF GRVWSEADEV 60 RILEGLAAYA AAHGAEPRRS QLHAALGGCG LDKSEFTVTE IYEKVRRLRT KYANRRSAGG 120 VPVPAAAGGA GDGDEARKYE LSRSIWGDLP LKKVGASHAT NASGNGNGNA NANAAPGTRA 180 RRGIEELQGL YPSLASAVEG ITDNESLRPV LKRAFQLISD ERARQLDAKV KKQRDMEAQM 240 AVKVTALRNE VLDTLTGSMD CFINDVKYEG
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT084259 | 0.0 | BT084259.1 Zea mays full-length cDNA clone ZM_BFb0094M03 mRNA, complete cds. |