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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G004356_P01 |
Common Name | pco139297, Zm.28767 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
bHLH |
Protein Properties |
Length: 285aa MW: 30265.2 Da PI: 7.0781 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G004356_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 26.1 | 1.6e-08 | 135 | 179 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
h+++Er RR+ri +++ L+el+P+ K + a++L + +Y+k L
GRMZM2G004356_P01 135 HSIAERLRRERIAERMRALQELVPNT-----NKTDRAAMLDEILDYVKFL 179
99***********************7.....5***************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009567 | Biological Process | double fertilization forming a zygote and endosperm |
GO:0031347 | Biological Process | regulation of defense response |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 285 aa
Download sequence Send
to blast |
MAGQPPPQGP EDDFFDQFFS MTAGGSYPGA TAGGGRAPGD QPFSLALSLD AAAAEASGSG 60 KHADGGKADR EAIQLPGLFP PAFGGGVQPP HLRATPPTQV FHAQQPKQGG AAVGPQPPAP 120 RPKVRARRGQ ATDPHSIAER LRRERIAERM RALQELVPNT NKTDRAAMLD EILDYVKFLR 180 LQVKVLSMSR LGGAGAVAQL VADIPLSVKG EASDSGSKQQ IWEKWSTDGT ERQVAKLMEE 240 DIGAAMQFLQ SKALCMMPIS LAMAIYDTQH SQDGQPVKPE PNTPS
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed constitutively in roots, leaves, stems, and flowers. {ECO:0000269|PubMed:12679534}. |
Functional Description ? help
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Source |
Description |
UniProt | Required for ovule fertilization. {ECO:0000269|PubMed:15634699}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU973411 | 0.0 | EU973411.1 Zea mays clone 398294 BHLH transcription factor mRNA, complete cds. |