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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G001699_P02 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
E2F/DP |
Protein Properties |
Length: 354aa MW: 39159.9 Da PI: 8.9254 |
Description |
E2F/DP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G001699_P02 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | E2F_TDP | 37.4 | 4.3e-12 | 143 | 184 | 11 | 57 |
E2F_TDP 11 qkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealn 57
++f+ l+++ + + + l+e+ak L v +rRRiYDi+NVLe+++
GRMZM2G001699_P02 143 TSFMVLYNRDNVESIGLDEAAKCL---GV--ERRRIYDIVNVLEGVG 184
578999999888************...**..**************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0005667 | Cellular Component | transcription factor complex |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 354 aa
Download sequence Send
to blast |
MDVDSRMATE SDSDSDARGG SGSGSETPTA SSSPSVVSLA PTASSSPSPS THPTPRRTTA 60 RSRPSSRRRR APRPGDRPLA RGEALPCPSL NHVLPPPPST LPPHIPRTPR DESVHARVWI 120 RGWSPRCSRM MVSVMSLLKT ELTSFMVLYN RDNVESIGLD EAAKCLGVER RRIYDIVNVL 180 EGVGACGAPL RICLYDNCHP RIPNRRCPPL TRFLTSLTGD FSKGYNKWWS RNPNGVPQES 240 LGYKQAGIPH LKWFGVEGQY NVMVIDLLGP SLKGLFNYCS RKFSLKTVLM LADQMCLSNQ 300 EQIVELLERE KLEKKPQDPA AEPICLPIEF LKAITCNFST ERELGRCFGV DMVG
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Expression -- UniGene
? help Back to Top |
UniGene ID |
E-value |
Expressed in |
Zm.82819 | 5e-67 | aerial organ| ear| endosperm| meristem| pericarp| pollen| root |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AY530951 | 0.0 | AY530951.1 Zea mays putative growth-regulating factor 1 (Z214A02.12), putative 40S ribosomal protein S8 (Z214A02.25), and putative casein kinase I (Z214A02.27) genes, complete cds. |