PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

FANhyb_rscf00006669.1.g00001.1

Organism

Fragaria x ananassa

Taxonomic ID

3747

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria

Family

bHLH

Protein Properties

Length: 156aa MW: 17236.2 Da PI: 9.9721

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
FANhyb_rscf00006669.1.g00001.1	genome	kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	19.6	1.7e-06	128	154	5	34
HHHHHHHHHHHHHHHHHHHHCTSCCC...T CS HLH 5 hnerErrRRdriNsafeeLrellPkaskap 34 h Er RR+++++ f++L llP++ p FANhyb_rscf00006669.1.g00001.1 128 HIYTERERRKKMRNMFANLHALLPQL---P 154 7778*********************6...4 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	1.89E-6	122	154	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	8.912	123	156	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	9.6E-5	128	155	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 156 aa Download sequence Send to blast
MFKPDAGAGG SNGVLWANQS WANLSNSTDK FLLNSNSENS AGGGVEGKDK LEKEKEIMDR 60 EDQVQPELEP EAALGKKTLA KKRGGRVGSS SFKKHNGKTV KEKGKASSEE VVKEGRRGSD 120 SEDDHELHIY TERERRKKMR NMFANLHALL PQLPSK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004309748.2	1e-102	PREDICTED: transcription factor bHLH95
TrEMBL	A0A2P6PMJ1	8e-66	A0A2P6PMJ1_ROSCH; Putative transcription factor bHLH family
STRING	XP_004309748.1	1e-102	(Fragaria vesca)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF4773	33	58

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49770.1	9e-15	bHLH family protein