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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
FANhyb_rscf00005688.1.g00001.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family |
NAC |
Protein Properties |
Length: 230aa MW: 26629.8 Da PI: 5.4982 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
FANhyb_rscf00005688.1.g00001.1 | genome | kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 86.2 | 6.4e-27 | 18 | 151 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk......kvka.eekewyfFskrdkkyatg 71
lppG++F+P e+l+v+yL++k++g+++ e ++ +d+y k ePw++ + ++k e++++yfF++ ++k+++g
FANhyb_rscf00005688.1.g00001.1 18 LPPGYKFRPDKEQLLVHYLRPKLDGEDFAQ-ELVPFCDLYgKKEPWQIWNdyfqelSAKDkERTDLYFFTQLKTKTPKG 95
79*************************988.89*****99456*****644566542222133477************* PP
NAM 72 krknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
k+ +r++ sg+Wk kevl+++++++g ++ + + +++ ++++ +W+mhe++l
FANhyb_rscf00005688.1.g00001.1 96 KHIKRTVGSGTWKGEDAPKEVLAASQRVIGKRRRFRYG-NDKDSAQNDRWLMHEFEL 151
************************************98.6777889*********97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 230 aa
Download sequence Send
to blast |
MCASCPSVQN PMAVDDDLPP GYKFRPDKEQ LLVHYLRPKL DGEDFAQELV PFCDLYGKKE 60 PWQIWNDYFQ ELSAKDKERT DLYFFTQLKT KTPKGKHIKR TVGSGTWKGE DAPKEVLAAS 120 QRVIGKRRRF RYGNDKDSAQ NDRWLMHEFE LDASLLRNKR KAKDYVLCIL RKKSRSVKKN 180 SEDQEGDETS CDGGDDQQDG DLPEAKKNND HKDSETVSLE EMENLLMSDD
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 2e-20 | 17 | 179 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-20 | 17 | 179 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-20 | 17 | 179 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-20 | 17 | 179 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-20 | 17 | 179 | 19 | 174 | NAC domain-containing protein 19 |
3swm_B | 2e-20 | 17 | 179 | 19 | 174 | NAC domain-containing protein 19 |
3swm_C | 2e-20 | 17 | 179 | 19 | 174 | NAC domain-containing protein 19 |
3swm_D | 2e-20 | 17 | 179 | 19 | 174 | NAC domain-containing protein 19 |
3swp_A | 2e-20 | 17 | 179 | 19 | 174 | NAC domain-containing protein 19 |
3swp_B | 2e-20 | 17 | 179 | 19 | 174 | NAC domain-containing protein 19 |
3swp_C | 2e-20 | 17 | 179 | 19 | 174 | NAC domain-containing protein 19 |
3swp_D | 2e-20 | 17 | 179 | 19 | 174 | NAC domain-containing protein 19 |
4dul_A | 2e-20 | 17 | 179 | 16 | 171 | NAC domain-containing protein 19 |
4dul_B | 2e-20 | 17 | 179 | 16 | 171 | NAC domain-containing protein 19 |
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