PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | FANhyb_rscf00005164.1.g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 294aa MW: 32343.6 Da PI: 7.5008 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 28.4 | 4.5e-09 | 4 | 87 | 2 | 76 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLpk.....kvka....eekewyfFskrdkkyatg 71 p rF P d+el+ +yLk+ v+g+ ++ ++ + + d+y ++eP ++ + + ++k++yfF++++k ++ FANhyb_rscf00005164.1.g00001.1 4 LPSQRFCPMDDELLFHYLKPMVNGQMVPGKDSlFCDSDLYgNLEPCQIWQefksrH--VndlrKNKDMYFFIQNKKPAPMR 82 5778**********************99888769999999457*****75244442..0445566799*****99988754 PP NAM 72 krknr 76 ++ r FANhyb_rscf00005164.1.g00001.1 83 GNQVR 87 44444 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.27E-7 | 2 | 87 | IPR003441 | NAC domain |
Pfam | PF02365 | 8.0E-5 | 6 | 79 | IPR003441 | NAC domain |
PRINTS | PR01217 | 1.0E-9 | 88 | 104 | No hit | No description |
PRINTS | PR01217 | 1.0E-9 | 108 | 120 | No hit | No description |
PRINTS | PR01217 | 1.0E-9 | 184 | 200 | No hit | No description |
PRINTS | PR01217 | 1.0E-9 | 204 | 221 | No hit | No description |
PRINTS | PR01217 | 1.0E-9 | 234 | 259 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 294 aa Download sequence Send to blast |
MGLLPSQRFC PMDDELLFHY LKPMVNGQMV PGKDSLFCDS DLYGNLEPCQ IWQEFKSRHV 60 NDLRKNKDMY FFIQNKKPAP MRGNQVRQPS PVTTGGVVPP LPTTPNAPLP PTQNPPDTPP 120 SIAISTDQVA TFQAAVDSLH SQNDDLQQSI NAIAHNQTFM TQQFAAFQNA LFHNLAHGQP 180 LLSPTLHPQP PAPLPSLGLS SQPIPSSSHT TISPQPPHRS PTQLIFGSLP PIPHTPAPLH 240 PPNTTHQAIY NPPPPPFSPS YTTPQHPTPP PQQHSYTPPL PTPPPNNFQR PPHP |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF557 | 24 | 133 |