PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

FANhyb_rscf00005164.1.g00001.1

Organism

Fragaria x ananassa

Taxonomic ID

3747

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria

Family

NAC

Protein Properties

Length: 294aa MW: 32343.6 Da PI: 7.5008

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
FANhyb_rscf00005164.1.g00001.1	genome	kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	28.4	4.5e-09	4	87	2	76
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLpk.....kvka....eekewyfFskrdkkyatg 71 p rF P d+el+ +yLk+ v+g+ ++ ++ + + d+y ++eP ++ + + ++k++yfF++++k ++ FANhyb_rscf00005164.1.g00001.1 4 LPSQRFCPMDDELLFHYLKPMVNGQMVPGKDSlFCDSDLYgNLEPCQIWQefksrH--VndlrKNKDMYFFIQNKKPAPMR 82 5778********************99888769999999457*75244442..0445566799***99988754 PP NAM 72 krknr 76 ++ r FANhyb_rscf00005164.1.g00001.1 83 GNQVR 87 44444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	3.27E-7	2	87	IPR003441	NAC domain
Pfam	PF02365	8.0E-5	6	79	IPR003441	NAC domain
PRINTS	PR01217	1.0E-9	88	104	No hit	No description
PRINTS	PR01217	1.0E-9	108	120	No hit	No description
PRINTS	PR01217	1.0E-9	184	200	No hit	No description
PRINTS	PR01217	1.0E-9	204	221	No hit	No description
PRINTS	PR01217	1.0E-9	234	259	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence Send to blast
MGLLPSQRFC PMDDELLFHY LKPMVNGQMV PGKDSLFCDS DLYGNLEPCQ IWQEFKSRHV 60 NDLRKNKDMY FFIQNKKPAP MRGNQVRQPS PVTTGGVVPP LPTTPNAPLP PTQNPPDTPP 120 SIAISTDQVA TFQAAVDSLH SQNDDLQQSI NAIAHNQTFM TQQFAAFQNA LFHNLAHGQP 180 LLSPTLHPQP PAPLPSLGLS SQPIPSSSHT TISPQPPHRS PTQLIFGSLP PIPHTPAPLH 240 PPNTTHQAIY NPPPPPFSPS YTTPQHPTPP PQQHSYTPPL PTPPPNNFQR PPHP

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF557	24	133