PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Gene Ontology |

Function |

Regulation |

Orthologous Group |

Publication

Basic Information? help Back to Top

TF ID

FANhyb_rscf00004448.1.g00001.1

Organism

Fragaria x ananassa

Taxonomic ID

3747

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria

Family

VOZ

Protein Properties

Length: 392aa MW: 43481.7 Da PI: 5.2899

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
FANhyb_rscf00004448.1.g00001.1	genome	kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	444.5	1.2e-136	116	332	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipe 79 pppsaflgpkcalwdc+rpaqg +w+qdycssfha+lalneg+pg++pvlrp+gi+lkdgllfaal+ak+qgk+vgipe FANhyb_rscf00004448.1.g00001.1 116 PPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDGLLFAALRAKAQGKDVGIPE 194 89*************************************************************************** PP VOZ 80 cegaatakspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymd 158 cegaatakspwna+elfdl +lege +rewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+efgglkrsyymd FANhyb_rscf00004448.1.g00001.1 195 CEGAATAKSPWNAPELFDLFVLEGEMLREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNEFGGLKRSYYMD 273 *************************************************************************** PP VOZ 159 pqpsssfewhlyeyeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 pqp++ fewhlyeyein++da+alyrlelklvd+kk++kgk+s+ds+adlqk++grl+a FANhyb_rscf00004448.1.g00001.1 274 PQPLNLFEWHLYEYEINKCDACALYRLELKLVDGKKNSKGKLSNDSVADLQKQMGRLSA 332 *******************************************************97 PP

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009408	Biological Process	response to heat
GO:0009414	Biological Process	response to water deprivation
GO:0009631	Biological Process	cold acclimation
GO:0009816	Biological Process	defense response to bacterium, incompatible interaction
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0048578	Biological Process	positive regulation of long-day photoperiodism, flowering
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence Send to blast
LCEEEDDASS PLAAPKPEPN DQKLDTGESL VFQEGFSVNH GQQEHSFPMA DQCKSSLLGV 60 RSAGVNNLQG VNQLDYHQLD LRQSFDHNYY TCFNGTALSV EDDLSHATSY LPSICPPPSA 120 FLGPKCALWD CPRPAQGLDW CQDYCSSFHA ALALNEGPPG MAPVLRPGGI GLKDGLLFAA 180 LRAKAQGKDV GIPECEGAAT AKSPWNAPEL FDLFVLEGEM LREWLFFDKP RRAFESGNRK 240 QRSLPDYNGR GWHESRKQVM NEFGGLKRSY YMDPQPLNLF EWHLYEYEIN KCDACALYRL 300 ELKLVDGKKN SKGKLSNDSV ADLQKQMGRL SAEFPSDNKR NVKGRAKVNA KVGVGTVYYT 360 PSQGTATNGT FDYGTGPPYD YLVDNLSGYY LT

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence Send to blast

LCEEEDDASS PLAAPKPEPN DQKLDTGESL VFQEGFSVNH GQQEHSFPMA DQCKSSLLGV  60
RSAGVNNLQG VNQLDYHQLD LRQSFDHNYY TCFNGTALSV EDDLSHATSY LPSICPPPSA  120
FLGPKCALWD CPRPAQGLDW CQDYCSSFHA ALALNEGPPG MAPVLRPGGI GLKDGLLFAA  180
LRAKAQGKDV GIPECEGAAT AKSPWNAPEL FDLFVLEGEM LREWLFFDKP RRAFESGNRK  240
QRSLPDYNGR GWHESRKQVM NEFGGLKRSY YMDPQPLNLF EWHLYEYEIN KCDACALYRL  300
ELKLVDGKKN SKGKLSNDSV ADLQKQMGRL SAEFPSDNKR NVKGRAKVNA KVGVGTVYYT  360
PSQGTATNGT FDYGTGPPYD YLVDNLSGYY LT

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004293908.2	0.0	PREDICTED: transcription factor VOZ1 isoform X1
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A2P6Q4C3	0.0	A0A2P6Q4C3_ROSCH; Putative transcription factor VOZ family
STRING	XP_004293908.1	0.0	(Fragaria vesca)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1498	34	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]