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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
FANhyb_rscf00003745.1.g00001.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family |
NAC |
Protein Properties |
Length: 348aa MW: 39382.4 Da PI: 8.4071 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
FANhyb_rscf00003745.1.g00001.1 | genome | kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 178.2 | 2.3e-55 | 23 | 148 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk 79
lppGfrFhPtdeel+++yL+kkv ++++ + ++i +vd++k+ePwdLp k+k +ekewyfF+ rd+ky+tg r+nrat+
FANhyb_rscf00003745.1.g00001.1 23 LPPGFRFHPTDEELISHYLQKKVIDSNFGC-KAIGDVDLNKSEPWDLPYKAKMGEKEWYFFCVRDRKYPTGLRTNRATE 100
79*************************999.88***************99999************************** PP
NAM 80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+gyWkatgkdke+++ +++lvg+kktLvfy grapkgek++Wvmhey l
FANhyb_rscf00003745.1.g00001.1 101 AGYWKATGKDKEIYK-GKSLVGMKKTLVFYMGRAPKGEKSNWVMHEYIL 148
***************.999****************************87 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 348 aa
Download sequence Send
to blast |
MMQEMEKLAL PTGTFKEDNQ IDLPPGFRFH PTDEELISHY LQKKVIDSNF GCKAIGDVDL 60 NKSEPWDLPY KAKMGEKEWY FFCVRDRKYP TGLRTNRATE AGYWKATGKD KEIYKGKSLV 120 GMKKTLVFYM GRAPKGEKSN WVMHEYILEG KFSVHNLPKS AKVWSLKNLP VVKKFHISGL 180 PNSGSHGTET GSSGLPPLLD SAPYNGAKTR PASESTYVPC FSNQESIDSQ RNQGIVDYIN 240 NNNPLFSVSS NPSNNNNNAF PRVTYQYSAP VSSANFQFPS SVVMQDHLRA LLENNVSFMR 300 QSFKTERDMN SVSQETGLIT DVNPEISSVM ANHEIGRRPF DDQDSFWM
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 1e-49 | 19 | 148 | 13 | 142 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-49 | 19 | 148 | 13 | 142 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-49 | 19 | 148 | 13 | 142 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-49 | 19 | 148 | 13 | 142 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-49 | 19 | 148 | 16 | 145 | NAC domain-containing protein 19 |
3swm_B | 1e-49 | 19 | 148 | 16 | 145 | NAC domain-containing protein 19 |
3swm_C | 1e-49 | 19 | 148 | 16 | 145 | NAC domain-containing protein 19 |
3swm_D | 1e-49 | 19 | 148 | 16 | 145 | NAC domain-containing protein 19 |
3swp_A | 1e-49 | 19 | 148 | 16 | 145 | NAC domain-containing protein 19 |
3swp_B | 1e-49 | 19 | 148 | 16 | 145 | NAC domain-containing protein 19 |
3swp_C | 1e-49 | 19 | 148 | 16 | 145 | NAC domain-containing protein 19 |
3swp_D | 1e-49 | 19 | 148 | 16 | 145 | NAC domain-containing protein 19 |
4dul_A | 1e-49 | 19 | 148 | 13 | 142 | NAC domain-containing protein 19 |
4dul_B | 1e-49 | 19 | 148 | 13 | 142 | NAC domain-containing protein 19 |
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Functional Description ? help
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Source |
Description |
UniProt | Binds to the promoter regions of genes involved in chlorophyll catabolic processes, such as NYC1, SGR1, SGR2 and PAO. {ECO:0000269|PubMed:27021284}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Repressed by the microRNA miR164. {ECO:0000269|PubMed:15294871, ECO:0000269|PubMed:17098808}. |