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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
FANhyb_rscf00002690.1.g00001.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family |
NAC |
Protein Properties |
Length: 469aa MW: 53175.7 Da PI: 7.2821 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
FANhyb_rscf00002690.1.g00001.1 | genome | kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 159.6 | 1.2e-49 | 35 | 160 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratks 80
+pGfrFhPt+eel+ +yL++kvegk++++ e i+ +d+y+++Pw+Lp++++ +ekew+f+++rd+ky++g+r+nr+t+s
FANhyb_rscf00002690.1.g00001.1 35 MPGFRFHPTEEELIEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPAMAAIGEKEWFFYVPRDRKYRNGDRPNRVTTS 112
79***************************.89***************888889************************** PP
NAM 81 gyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
gyWkatg d+ + s++ + +glkktLvfy+g+apkg +t+W+m+eyrl
FANhyb_rscf00002690.1.g00001.1 113 GYWKATGADRMIRSENFRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRL 160
**********************************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 469 aa
Download sequence Send
to blast |
MAIAATRMSH EEDESNKQHH EVEVDHDEHE HDMVMPGFRF HPTEEELIEF YLRRKVEGKR 60 FNVELITFLD LYRYDPWELP AMAAIGEKEW FFYVPRDRKY RNGDRPNRVT TSGYWKATGA 120 DRMIRSENFR SIGLKKTLVF YSGKAPKGIR TSWIMNEYRL PHHETERYQK GEISLCRVYK 180 RPGVEDHPSL PRSLPSSRAA AANANGASTS RSLLQAQSSS SSSLNKKQHS INSSLMEKLQ 240 ANFNFNGGSS SLGQSVQQLH HHHHQDQVAA DPKINETEGS SGNSDVTSTL GVGLRSSATN 300 IPIHHPSSPL GLQPHHHHHG GVLHLDDHHA EQEGISTFLQ QHHHHSKPQT LLFAGSSVSA 360 TSNVIDDLQR LLNYQQQQAV SNIANQQQAL HVQQYYDAHS HNHNHNQQLP SNVVNHFSSP 420 FPLVPPPPSQ SQLSPNGLQV TAFSDRLWDW NPISEPNRAP DQYNTNPFK
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 1e-54 | 36 | 181 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-54 | 36 | 181 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-54 | 36 | 181 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-54 | 36 | 181 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-54 | 36 | 181 | 22 | 168 | NAC domain-containing protein 19 |
3swm_B | 1e-54 | 36 | 181 | 22 | 168 | NAC domain-containing protein 19 |
3swm_C | 1e-54 | 36 | 181 | 22 | 168 | NAC domain-containing protein 19 |
3swm_D | 1e-54 | 36 | 181 | 22 | 168 | NAC domain-containing protein 19 |
3swp_A | 1e-54 | 36 | 181 | 22 | 168 | NAC domain-containing protein 19 |
3swp_B | 1e-54 | 36 | 181 | 22 | 168 | NAC domain-containing protein 19 |
3swp_C | 1e-54 | 36 | 181 | 22 | 168 | NAC domain-containing protein 19 |
3swp_D | 1e-54 | 36 | 181 | 22 | 168 | NAC domain-containing protein 19 |
4dul_A | 1e-54 | 36 | 181 | 19 | 165 | NAC domain-containing protein 19 |
4dul_B | 1e-54 | 36 | 181 | 19 | 165 | NAC domain-containing protein 19 |
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