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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
FANhyb_rscf00002493.1.g00001.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family |
Trihelix |
Protein Properties |
Length: 480aa MW: 55084.5 Da PI: 8.7539 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
FANhyb_rscf00002493.1.g00001.1 | genome | kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 38.4 | 3.2e-12 | 2 | 49 | 38 | 87 |
trihelix 38 mrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
+ e g++rs+k+Ckek+en+ k+++++keg++++ ++ +t+++fd+lea
FANhyb_rscf00002493.1.g00001.1 2 LGELGYKRSAKKCKEKFENVYKYHRRTKEGRSGK--PEGKTYRFFDELEA 49
5689****************************95..55568******985 PP
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2 | trihelix | 103 | 2.2e-32 | 317 | 402 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79
rW+k ev+aLi++r++++ +++++ k+ lWee+s+ mr+ g++rs+k+Ckekwen+nk++kk+ke++k r +e+s+tc
FANhyb_rscf00002493.1.g00001.1 317 RWPKTEVQALIDLRTSLDVKYQDAGPKGSLWEEISAGMRRLGYNRSSKRCKEKWENINKYFKKVKESSKTR-PEDSKTC 394
8********************************************************************97.99***** PP
trihelix 80 pyfdqlea 87
pyf+qlea
FANhyb_rscf00002493.1.g00001.1 395 PYFHQLEA 402
******85 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 480 aa
Download sequence Send
to blast |
KLGELGYKRS AKKCKEKFEN VYKYHRRTKE GRSGKPEGKT YRFFDELEAF DHQQNSHNLS 60 IIPPKPPVML WTNNSNHHPN QSVPPPVVTV PQNGVTPATD PIIHSSTNNS LLPQQINSSQ 120 DNTNGFRLLN PTTNLFSSST SSTTASDEEF QQRNKRKRKW KYFFRRLTKQ VLEKQERLQE 180 NFLEAIAKCD QERMVKEEAW RMQEMARIDR DHEVLVQERS SAAAKDAALI QFLQKVSLQH 240 NSNDTRSLEI NDAAAMLVIP PPTNVPRPPL PALPVSWAID QRGLTASSDG AVTPRNLEAK 300 KVYGNGENNS AVMGSSRWPK TEVQALIDLR TSLDVKYQDA GPKGSLWEEI SAGMRRLGYN 360 RSSKRCKEKW ENINKYFKKV KESSKTRPED SKTCPYFHQL EALYRNKNNN KIEYHKDRSV 420 EKLQIVQQPL RENVDPNLEE HEHDDHGDQD GESTEEDQEH DQIGGIVTSY KQSSMEMVES
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that binds specific DNA sequence. {ECO:0000250}. |