PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00002145.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family C2H2
Protein Properties Length: 346aa    MW: 37632.5 Da    PI: 4.3851
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00002145.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.72.1e-05260280222
                                     EETTTTEEESSHHHHHHHHHH CS
                         zf-C2H2   2 kCpdCgksFsrksnLkrHirt 22 
                                     +C+ Cg+++ +   L++H+++
  FANhyb_rscf00002145.1.g00001.1 260 VCNFCGRRYETAAALEKHQKK 280
                                     7******************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MSFFGGPSGY GESRDYGGSG GTKTSDGHGG TLLYNKKATS KVKYSVCDPH SLSLRFSHVQ  60
MSFSPAGESP LPSELAPASM FDSGSGSETG IGTHGGCKAA TGSPSGSASH GITVSEAHID  120
PQVSTDCTLP ATPSASLSSV LGYAICRHCG LTGFLNDEAF EAHLRENEEE EAHVIPLIVE  180
EEQAVNGEEV VGGDFLVEEA VNEDDEVVEE VEDEDDDELV EEVVNEDDET VEEEVEDEDD  240
DELVEEEAKK KKKKKKDGVV CNFCGRRYET AAALEKHQKK YRMSYYKICG KCKNKLLCKG  300
DYEVHRRGCK GPDGFEYSLP TDKLEAAFSV LTIKRFLNYR LCLAFT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1249255KKKKKKK
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3447622