PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Orthologous Group |

Basic Information? help Back to Top

TF ID

FANhyb_rscf00001319.1.g00006.1

Organism

Fragaria x ananassa

Taxonomic ID

3747

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria

Family

G2-like

Protein Properties

Length: 254aa MW: 28526.9 Da PI: 8.8625

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
FANhyb_rscf00001319.1.g00006.1	genome	kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	35.5	2.2e-11	2	25	32	55
G2-like 32 ilelmkvkgLtlehvkSHLQkYRl 55 +l+lm++kgL+++hvkSHLQ+YR+ FANhyb_rscf00001319.1.g00006.1 2 VLQLMNIKGLSIAHVKSHLQMYRS 25 89*********************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	5.1E-10	2	26	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence Send to blast
MVLQLMNIKG LSIAHVKSHL QMYRSKKIDD AGQVIGDQGH HLVECGDKNI YNLSQLPMLQ 60 GYNRSHMSTS FRYGYGDSNS WSTSAFENLR HPRSTSGIFQ GTIAEKLFGS STSNWNSTAY 120 SNFRTSSEQV PSWITHTLKD ECSQLYNIRR QSLQAHQARL SIIDHLNPTT HVQPKANDHF 180 TSLSSTATNL QELKTLKRKA SDCDLDLDLS LRLTTKNNDE SPRSTTLKDN EVDCTSLSLS 240 LYSPASAKLS RVKE

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004302585.1	0.0	PREDICTED: probable transcription factor KAN2
TrEMBL	A0A2P6R8W9	1e-156	A0A2P6R8W9_ROSCH; Putative transcription factor MYB-HB-like family
STRING	XP_004302585.1	0.0	(Fragaria vesca)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2378	34	82

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	6e-28	G2-like family protein