 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
FANhyb_rscf00000917.1.g00008.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
|
| Family |
WRKY |
| Protein Properties |
Length: 323aa MW: 36096.9 Da PI: 10.2086 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| FANhyb_rscf00000917.1.g00008.1 | genome | kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 29.9 | 1.1e-09 | 281 | 301 | 3 | 24 |
-SS-EEEEEEE--TT-SS-EEE CS
WRKY 3 DgynWrKYGqKevkgsefprsY 24
D y+WrKYGqK++kgs++p sY
FANhyb_rscf00000917.1.g00008.1 281 DDYSWRKYGQKPIKGSPHP-SY 301
99****************9.44 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0005516 | Molecular Function | calmodulin binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 323 aa
Download sequence Send
to blast |
MEEVEEANKA AVASCHRVLS LLSQPQDQVQ FRNLEVETGK AVFRFKKVVS LLNTGLGHAR 60
VRKLKKLQIP FPESVLLDNP NCTTDHHSKT PHFLQSRFAE NPSQDLSLGV RNSLSLGNPS 120
LELSTNNGKT PIQLAQQALP PAHYHFLQQQ QQQQQRLLLQ QQQMKQQAEM MYRRSNSGIN 180
LNFDSSSCTP TMSSTRSFIS SLSIDGSVAN LDGNSFHLIG APISSDQNSQ HKRKCSARGD 240
DGSAKCGSSG RCHCSKKRKH RVKRSIKVPA ISNKLADIPP DDYSWRKYGQ KPIKGSPHPS 300
YWNFAALLAV NLDARQLYKE LEI
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By salicylic acid. {ECO:0000269|PubMed:11449049}. |
