PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_rscf00000582.1.g00002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | Trihelix | ||||||||
Protein Properties | Length: 205aa MW: 22516.7 Da PI: 4.4995 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 55.1 | 2e-17 | 7 | 94 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsess 76 +W+++ + +Li+a ++ +l+rg+l++++W+ev++++ + ++ +r+ +qCk++++ ++k+yk +k++ +++ FANhyb_rscf00000582.1.g00002.1 7 CWSEDATSTLIDAWGRRYVELNRGNLRQKDWQEVADAVnalhgHTKKTHRTDVQCKNRIDTIKKKYKVEKARVSGG---FN 84 7****************************************99999***************************997...56 PP trihelix 77 stcpyfdqle 86 s++p+fd+l+ FANhyb_rscf00000582.1.g00002.1 85 SSWPFFDRLD 94 67******98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 6.1E-28 | 5 | 96 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence Send to blast |
MPVREDCWSE DATSTLIDAW GRRYVELNRG NLRQKDWQEV ADAVNALHGH TKKTHRTDVQ 60 CKNRIDTIKK KYKVEKARVS GGFNSSWPFF DRLDSLIGST VKKPSPSLSP PVAVPLPLAY 120 RKPSPARPVV TAVALPQKRS ASAAALNEGF LRMNYSAVAA AAAAENDDDD DEDEEEEEDN 180 DDGDEEAEVE KERDSDGETG GGGGE |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00413 | DAP | Transfer from AT3G58630 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004293945.1 | 1e-114 | PREDICTED: trihelix transcription factor ASIL2-like isoform X1 | ||||
Swissprot | Q9LJG8 | 7e-38 | ASIL2_ARATH; Trihelix transcription factor ASIL2 | ||||
TrEMBL | A0A498JUD9 | 8e-88 | A0A498JUD9_MALDO; Uncharacterized protein | ||||
STRING | XP_004293944.1 | 1e-114 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1887 | 33 | 79 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58630.1 | 5e-41 | sequence-specific DNA binding transcription factors |