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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
FANhyb_rscf00000399.1.g00005.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family |
NAC |
Protein Properties |
Length: 287aa MW: 32928 Da PI: 8.5484 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
FANhyb_rscf00000399.1.g00005.1 | genome | kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 174.9 | 2.3e-54 | 9 | 134 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk 79
lppGfrFhPtdeel+v+yLk+++ +k++++ ++i+evdiyk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nrat
FANhyb_rscf00000399.1.g00005.1 9 LPPGFRFHPTDEELIVYYLKNQAISKPCPV-SIIPEVDIYKFDPWQLPEKAEFGENEWYFFSPRDRKYPNGVRPNRATV 86
79****************************.89***************99999************************** PP
NAM 80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
sgyWkatg+dk+++s ++ vg+kk Lvfykgr pkg ktdW+mheyrl
FANhyb_rscf00000399.1.g00005.1 87 SGYWKATGTDKAIHS-ASKYVGVKKALVFYKGRPPKGIKTDWIMHEYRL 134
***************.9999***************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 287 aa
Download sequence Send
to blast |
MEANSSSGLP PGFRFHPTDE ELIVYYLKNQ AISKPCPVSI IPEVDIYKFD PWQLPEKAEF 60 GENEWYFFSP RDRKYPNGVR PNRATVSGYW KATGTDKAIH SASKYVGVKK ALVFYKGRPP 120 KGIKTDWIMH EYRLSDSKRQ ATKQLGSMRL DDWVLCRIYK KRHVNKAYMD PKLEDSSPQM 180 DHFTAANDVK EEQGVNFPRN FSFSSFLDMD YLGPISQLLN ENPTYDFQNM LATNAGLNGQ 240 TFQFGDQIPY QSADSGKFQV MNQSNSTLNQ PLFVNPAYNN NMNGLNH
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 2e-70 | 9 | 162 | 17 | 166 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-70 | 9 | 162 | 17 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-70 | 9 | 162 | 17 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-70 | 9 | 162 | 17 | 166 | NO APICAL MERISTEM PROTEIN |
3swm_A | 3e-70 | 9 | 162 | 20 | 169 | NAC domain-containing protein 19 |
3swm_B | 3e-70 | 9 | 162 | 20 | 169 | NAC domain-containing protein 19 |
3swm_C | 3e-70 | 9 | 162 | 20 | 169 | NAC domain-containing protein 19 |
3swm_D | 3e-70 | 9 | 162 | 20 | 169 | NAC domain-containing protein 19 |
3swp_A | 3e-70 | 9 | 162 | 20 | 169 | NAC domain-containing protein 19 |
3swp_B | 3e-70 | 9 | 162 | 20 | 169 | NAC domain-containing protein 19 |
3swp_C | 3e-70 | 9 | 162 | 20 | 169 | NAC domain-containing protein 19 |
3swp_D | 3e-70 | 9 | 162 | 20 | 169 | NAC domain-containing protein 19 |
4dul_A | 2e-70 | 9 | 162 | 17 | 166 | NAC domain-containing protein 19 |
4dul_B | 2e-70 | 9 | 162 | 17 | 166 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds DNA motifs 5'-CGT[AG](5N)NACG[ACT][AC][AT][ACG][ACT]-3' and 5'-CACG[ACT][AC][AT][AGT][CT]-3' in target genes promoters. Promotes leaf senescence and reduces fruit yield and sugar content, probably by establishing abscisic acid (ABA) homeostasis. {ECO:0000269|PubMed:29760199}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Accumulates during age-dependent and dark-induced leaf senescence. {ECO:0000269|PubMed:29760199}. |