PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00000398.1.g00006.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family G2-like
Protein Properties Length: 373aa    MW: 41439.6 Da    PI: 7.021
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00000398.1.g00006.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like50.83.8e-1674120240
                         G2-like   2 prlrWtpeLHerFveaveqLGGse........kAtPktilelmkvkg 40 
                                     pr+rWtp+LH++Fv+av++LGG++        +AtPk+il++m+v+ 
  FANhyb_rscf00000398.1.g00006.1  74 PRIRWTPDLHRCFVHAVDSLGGEDsdyltslsRATPKKILQMMNVEA 120
                                     8*********************86555555558************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.1E-1471119IPR009057Homeodomain-like
SuperFamilySSF466891.97E-573122IPR009057Homeodomain-like
TIGRFAMsTIGR015573.2E-1074120IPR006447Myb domain, plants
SuperFamilySSF530676.47E-15166272No hitNo description
Gene3DG3DSA:3.30.420.408.2E-16166275No hitNo description
PRINTSPR007896.1E-7167180IPR017861Kae1/TsaD family
PRINTSPR007896.1E-7231251IPR017861Kae1/TsaD family
PfamPF008146.6E-18263330IPR000905Gcp-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    Send to blast
MAMNRVQLGE GSSVRRSVDK DTPHFSSYEN HETRNEPQQM QVHRENLPAE MMILQRPSGP  60
STAMLPHVSS NRVPRIRWTP DLHRCFVHAV DSLGGEDSDY LTSLSRATPK KILQMMNVEA  120
QSTQARIARV GEIYGKCLFY PWLIAAFSKF QNPSGFEFCG IELWIALGFE GSANKIGVGV  180
VCLDGTILSN PRHTYITPPG QGFLPRHTYI LPLVKSALEA AQVTLQEIDC LCYTKGPGMG  240
APLQVAAIVV RVLSQLWKKP IVAENVFAML VEITERAMAH CDKRDVLIVG GVGCNERLQE  300
MMKTMCAERG GRLFATDDRY CIDNGAMIAY TGLLAFAHGT STPLEESTFT QRFQTDEVEA  360
IWRVKEESAK ANG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6gwj_K4e-411673635334Probable tRNA N6-adenosine threonylcarbamoyltransferase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011460734.16e-71PREDICTED: probable tRNA N6-adenosine threonylcarbamoyltransferase
SwissprotQ9VV415e-43OSGEP_DROME; Probable tRNA N6-adenosine threonylcarbamoyltransferase
TrEMBLA0A480LTT91e-78A0A480LTT9_PIG; Putative tRNA N6-adenosine threonylcarbamoyltransferase
STRINGXP_004294126.12e-70(Fragaria vesca)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02060.15e-13G2-like family protein