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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
FANhyb_rscf00000370.1.g00001.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family |
NAC |
Protein Properties |
Length: 419aa MW: 46399.4 Da PI: 6.3233 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
FANhyb_rscf00000370.1.g00001.1 | genome | kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 136.2 | 2.2e-42 | 5 | 143 | 2 | 127 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgk 72
ppGfrF Pt+eelv++yL +k++g++ ++++i+ +diy+++PwdLp+ +++++++w+fF++r++++a+g
FANhyb_rscf00000370.1.g00001.1 5 PPGFRFYPTEEELVSFYLPHKLDGTRkdvnRVMDRIIPVLDIYEFNPWDLPRnsgeICHGDQEQWFFFIPRQESEARGG 83
9***********************9955532333479999**********9546654445778**************** PP
NAM 73 rknratksgyWkatgkdkevlsk.....kgelvglkktLvfykgrapkgektdWvmheyr 127
r++r t++gyWkatg+ v+s+ ++ ++glk+t+vfy+grap+g+kt+W m+ey+
FANhyb_rscf00000370.1.g00001.1 84 RPKRLTTTGYWKATGSPSYVYSSsssstNHGAIGLKRTMVFYTGRAPNGSKTEWKMNEYK 143
**********************9766665566***************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 419 aa
Download sequence Send
to blast |
MEDFPPGFRF YPTEEELVSF YLPHKLDGTR KDVNRVMDRI IPVLDIYEFN PWDLPRNSGE 60 ICHGDQEQWF FFIPRQESEA RGGRPKRLTT TGYWKATGSP SYVYSSSSSS TNHGAIGLKR 120 TMVFYTGRAP NGSKTEWKMN EYKAIEEDDQ LHAPSSSSNA APAPALRQEF SLCRVYKKSK 180 CLRAFDRRPS GTGDIMRRPT VTVQLPALPQ LGTDHHNEGS TYPTAISHAQ NIIPAAPNSY 240 NVEMERISTL SSSGSSSSGD HGQPSQSGQS TGSLPVAVDN GEPLWELDQL DWQEFSLCRV 300 YKKSKCLRAF DRRPSGTGDI MRRPTVTVQL PALPHLGTDH HNEGSTYPTA ISHAQNIIPA 360 APNSYNVEME RISTLSSSGS SSSGDHGQPS QSGQSTGSLP VAVDNGEPLW ELDQLDWFN
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 4e-33 | 4 | 178 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 4e-33 | 4 | 178 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 4e-33 | 4 | 178 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 4e-33 | 4 | 178 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
3swm_A | 4e-33 | 4 | 178 | 20 | 168 | NAC domain-containing protein 19 |
3swm_B | 4e-33 | 4 | 178 | 20 | 168 | NAC domain-containing protein 19 |
3swm_C | 4e-33 | 4 | 178 | 20 | 168 | NAC domain-containing protein 19 |
3swm_D | 4e-33 | 4 | 178 | 20 | 168 | NAC domain-containing protein 19 |
3swp_A | 4e-33 | 4 | 178 | 20 | 168 | NAC domain-containing protein 19 |
3swp_B | 4e-33 | 4 | 178 | 20 | 168 | NAC domain-containing protein 19 |
3swp_C | 4e-33 | 4 | 178 | 20 | 168 | NAC domain-containing protein 19 |
3swp_D | 4e-33 | 4 | 178 | 20 | 168 | NAC domain-containing protein 19 |
4dul_A | 4e-33 | 4 | 178 | 17 | 165 | NAC domain-containing protein 19 |
4dul_B | 4e-33 | 4 | 178 | 17 | 165 | NAC domain-containing protein 19 |
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