PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_rscf00000163.1.g00013.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | NAC | ||||||||
Protein Properties | Length: 442aa MW: 51037.6 Da PI: 4.197 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 65.7 | 1.3e-20 | 9 | 148 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkklele.evikevdiykv.ePwdLpk.....kvka....eekewyfFskrdkkyat 70 pG rF P ++el+++yL++kv+g +++ + +vi e+d+y +Pw++ + + a ++k++yfF++++k++a+ FANhyb_rscf00000163.1.g00013.1 9 PGQRFCPMEDELLMFYLEPKVNGMPVPGDgDVIYELDLYGDqDPWKIWQryeeeR--AndlrRNKDLYFFTQKKKTTAK 85 8************************7775156******97549****75244441..1345456689************ PP NAM 71 gkrknr.atksgyWkatgkdkevlsk......kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++r +r + + g+W+ + k+v+ ++++ glkkt ++ ++ + + +W+m e++l FANhyb_rscf00000163.1.g00013.1 86 SSRVRRtVGTGGTWRGQTAGKDVFLLdenhqpTTTVLGLKKTYTYR--NKGSVHDGRWIMYEFEL 148 ******5555899**8888888877644444444459******998..44445689*******97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 27.627 | 7 | 170 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 3.01E-24 | 8 | 169 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.6E-15 | 9 | 148 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 442 aa Download sequence Send to blast |
MEGDRMPLPG QRFCPMEDEL LMFYLEPKVN GMPVPGDGDV IYELDLYGDQ DPWKIWQRYE 60 EERANDLRRN KDLYFFTQKK KTTAKSSRVR RTVGTGGTWR GQTAGKDVFL LDENHQPTTT 120 VLGLKKTYTY RNKGSVHDGR WIMYEFELHK SQLKKQVNKN DYVLCLLRKN DLLPEKKRKR 180 QQEEESLEDY VEDDEAVNTD PESVSEEEPQ EKRQRLLPSL EDEQEQFLQV QPAPSLEAEQ 240 EALPTPLEDD PVFLQEGEFM EWQESDFASL EQFLQDESEA RPTALEAEQV SLLVDENSGL 300 QQLEAEPQLG EDNLEQQLDA VPLFAAQKIS AGIQSHPDEN MVQQVGGEAN MYSENLGDAM 360 HGENWHMSFA EELMNGEQPN TMEEGEWNAV YPGFDEQVSL RVDENSGLKQ LQAESQLGEK 420 IWSSNLMQYH CLQLKKTGLW KN |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011459909.1 | 0.0 | PREDICTED: uncharacterized protein LOC105350160 | ||||
TrEMBL | A0A2P6QGR3 | 1e-124 | A0A2P6QGR3_ROSCH; Putative transcription factor NAM family |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF557 | 24 | 133 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71930.1 | 9e-15 | vascular related NAC-domain protein 7 |