|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
FANhyb_rscf00000154.1.g00016.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
|
Family |
NAC |
Protein Properties |
Length: 280aa MW: 32611.3 Da PI: 6.8036 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
FANhyb_rscf00000154.1.g00016.1 | genome | kazusa | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 81.9 | 1.4e-25 | 5 | 133 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikev.diykvePwdLpk....kvkaeekewyfFskrdkkyatgkrk 74
p+GfrFhPtd++lv++yL++k++ + ++ ++++ + y++ePw+ + + ++ + ++fF+kr+k +++g+r
FANhyb_rscf00000154.1.g00016.1 5 PVGFRFHPTDNDLVSHYLRNKAKLGDgFRS-PYVSDCpEFYSWEPWTVWEkyggNSVEDGEPLFFFIKRKKLNPKGSRF 82
89*******************999884444.6699999**********742343222345577**************** PP
NAM 75 nratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
r++ +g+W+ + +v++ +g+++g+k+ + + g +++ ++ W+m+ey+l
FANhyb_rscf00000154.1.g00016.1 83 DRKVGTGTWSGQYF-AKVME-EGKVIGIKRNFRYE-GGSSSDQNNAWLMDEYEL 133
*********98876.66777.899*********98.55555699********97 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 280 aa
Download sequence Send
to blast |
MERFPVGFRF HPTDNDLVSH YLRNKAKLGD GFRSPYVSDC PEFYSWEPWT VWEKYGGNSV 60 EDGEPLFFFI KRKKLNPKGS RFDRKVGTGT WSGQYFAKVM EEGKVIGIKR NFRYEGGSSS 120 DQNNAWLMDE YELNKNDVTV LCVLRKNPTK PPPKTNETKR KLKDVVDGIE QDLDQRRKLI 180 SNLDQRRKLR GNYMPEKEGT SYREEQGGSS SSIDHHQASS SWTPKQEDYR PELAPDLAAA 240 DDFVFYTHDE LLASTSKSND FLDRFYEDNN FDQLVHKQVF
|
3D Structure ? help Back to Top |
|
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
3ulx_A | 4e-15 | 4 | 133 | 15 | 140 | Stress-induced transcription factor NAC1 |