PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_rscf00000096.1.g00005.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | NAC | ||||||||
Protein Properties | Length: 481aa MW: 54062.6 Da PI: 9.9063 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 45.7 | 2.1e-14 | 210 | 309 | 31 | 127 |
NAM 31 eevikevdiykvePwdLp.k...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk...kgelvgl 102 + ike+d+y+ +P dLp ++ + ++ ++F+ + + ++ ra +sgyW+ +g+ ++v+ ++++ g FANhyb_rscf00000096.1.g00005.1 210 YDLIKELDLYDRDPFDLPdYacySYGRGGRRRHWFCYTVRVL----KEWRA-RSGYWRRKGRVRDVVGGgggGKAVLGR 283 378***************535553333444555555555543....34554.78*************9887777789** PP NAM 103 kktLvfykgrapk.gektdWvmheyr 127 + ++vfy g++pk +++tdWv+ +y+ FANhyb_rscf00000096.1.g00005.1 284 RSSFVFYLGNSPKtAVRTDWVLYQYA 309 *******997766167*********6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 19.957 | 183 | 363 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 9.55E-17 | 204 | 320 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.8E-5 | 223 | 309 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 9.55E-17 | 351 | 361 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 481 aa Download sequence Send to blast |
MADTFPAAGS TPQNSSSSLI IYRTRKSIWQ YPGPTMGSEN CTTYGASNRQ SYRIGVGIGG 60 RGTGTFIWLE FGRRRRKRSR DIGKGQVSPD AVLTTCRFIS MYGMSDLYGC HRRGVIKAER 120 RERRASVPHS SHTHTRLQEH ATPPLYKPLS LSHSFFVSPK IVNLIIHGRC QSDVVLPPTR 180 LPILPLRGAA PLLLPLPQEH RRLRLRRHGY DLIKELDLYD RDPFDLPDYA CYSYGRGGRR 240 RHWFCYTVRV LKEWRARSGY WRRKGRVRDV VGGGGGGKAV LGRRSSFVFY LGNSPKTAVR 300 TDWVLYQYAQ VDHLQVAYLS LVLGLFDNFN LDEGVLSGVR TMLDDLKGLV SAASFVLCRV 360 FVRSQGGTNI SENALSSCAE ETVSTVRHIG IQHDGFYTPH IVPEIDGDKS VPRNTDKSKD 420 QMRPETEVDK QVETRLVSSI QTNGQVPLLS VSNPVLLDGL SSEHLLSRIE GDFIELDDLI 480 D |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004291091.1 | 1e-144 | PREDICTED: NAC domain-containing protein 72-like | ||||
Refseq | XP_011458921.1 | 1e-144 | PREDICTED: NAC domain-containing protein 72-like | ||||
TrEMBL | A0A2P6Q0J5 | 1e-130 | A0A2P6Q0J5_ROSCH; Putative transcription factor NAM family | ||||
STRING | XP_004291091.1 | 1e-144 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13001 | 26 | 28 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04070.1 | 4e-07 | NAC domain containing protein 47 |