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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
FANhyb_rscf00000084.1.g00007.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 215aa MW: 24729.9 Da PI: 6.5382 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| FANhyb_rscf00000084.1.g00007.1 | genome | kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 61.7 | 1.2e-19 | 56 | 110 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
k++++t+eq++ Le F +++++ e++ +LA++lgL+ rqV vWFqNrRa++k+
FANhyb_rscf00000084.1.g00007.1 56 KKRKLTEEQVTLLELNFGNEHKLESEKKDRLASQLGLDPRQVAVWFQNRRARWKN 110
45699************************************************95 PP
|
| 2 | HD-ZIP_I/II | 119.1 | 2.3e-38 | 56 | 147 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerL 80
kkr+l++eqv+lLE +F +e+kLe+e+K +la++Lgl+prqvavWFqnrRAR+k+k+lE++y++Lk+a+++++ e+++L
FANhyb_rscf00000084.1.g00007.1 56 KKRKLTEEQVTLLELNFGNEHKLESEKKDRLASQLGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKTAHENVVVEKCNL 134
9****************************************************************************** PP
HD-ZIP_I/II 81 ekeveeLreelke 93
e+e+++L+e+l+e
FANhyb_rscf00000084.1.g00007.1 135 ESEMQKLKERLSE 147
*********9976 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009733 | Biological Process | response to auxin |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 215 aa
Download sequence Send
to blast |
MTTTINNQVV DQDHMLLISQ MYPDVYTQIV PQVAATKPRR RRKKSKSGEA DGAGAKKRKL 60
TEEQVTLLEL NFGNEHKLES EKKDRLASQL GLDPRQVAVW FQNRRARWKN KKLEEEYSTL 120
KTAHENVVVE KCNLESEMQK LKERLSEAEK EIHRLSERVE GGGSSNSPSS SLSMEANIGG 180
PPPFFGEFGV EEYDDVFYMP QNNYINAMEW MNPYM
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 39 | 57 | RRRKKSKSGEADGAGAKKR |
| 2 | 41 | 58 | RKKSKSGEADGAGAKKRK |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By abscisic acid (ABA) and by salt stress. {ECO:0000269|PubMed:16055682}. |
